RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 CCDC153Q494R4 210 aa11□□□□□ -0.65
SCG3-202ENST00000542355 ZRANB3Q5FWF4 1079 aa11□□□□□ -0.65
SCG3-202ENST00000542355 ARSIQ5FYB1 569 aa11□□□□□ -0.65
SCG3-202ENST00000542355 GRAMD4Q6IC98 578 aa11□□□□□ -0.65
SCG3-202ENST00000542355 GDPD4Q6W3E5 623 aa11□□□□□ -0.65
SCG3-202ENST00000542355 TSPAN33Q86UF1 283 aa11□□□□□ -0.65
SCG3-202ENST00000542355 FGF14Q92915 247 aa11□□□□□ -0.65
SCG3-202ENST00000542355 E2F7Q96AV8 911 aa11□□□□□ -0.65
SCG3-202ENST00000542355 SCRN2Q96FV2 425 aa11□□□□□ -0.65
SCG3-202ENST00000542355 RIPOR3Q96MK2 946 aa11□□□□□ -0.65
SCG3-202ENST00000542355 HEPHQ9BQS7 1158 aa11□□□□□ -0.65
SCG3-202ENST00000542355 POMKQ9H5K3 350 aa11□□□□□ -0.65
SCG3-202ENST00000542355 NMRAL1Q9HBL8 299 aa11□□□□□ -0.65
SCG3-202ENST00000542355 DCTN4Q9UJW0 460 aa11□□□□□ -0.65
SCG3-202ENST00000542355 UBA6A0AVT1 1052 aaPredicted RBP10.99□□□□□ -0.65
SCG3-202ENST00000542355 NPIPB15A6NHN6 443 aaPredicted RBP10.99□□□□□ -0.65
SCG3-202ENST00000542355 GOLGA8CPA6NN73 597 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 GPR39O43194 453 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 SNX3O60493 162 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 EDF1O60869 148 aaKnown RBP10.99□□□□□ -0.65
SCG3-202ENST00000542355 GLRBP48167 497 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 CDKN2DP55273 166 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 CHI3L2Q15782 390 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 CTC1Q2NKJ3 1217 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 LRRC73Q5JTD7 316 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 CGB2Q6NT52 195 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 PSAPL1Q6NUJ1 521 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 ZNF549Q6P9A3 640 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 CRTC1Q6UUV9 634 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 SFTPA1Q8IWL2 248 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 PIANPQ8IYJ0 282 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 CACNA2D3Q8IZS8 1091 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 CPA6Q8N4T0 437 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 KCTD4Q8WVF5 259 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 THOC1Q96FV9 657 aaKnown RBP10.99□□□□□ -0.65
SCG3-202ENST00000542355 TSNARE1Q96NA8 513 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 C1QTNF1Q9BXJ1 281 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 UNKQ9C0B0 810 aaKnown RBP10.99□□□□□ -0.65
SCG3-202ENST00000542355 BRD9Q9H8M2 597 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 ANKRD6Q9Y2G4 727 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 C2orf16Q68DN1 1984 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 TBC1D3BA6NDS4 549 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 H7C0S8 307 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 BIRC5O15392 142 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 NDUFS3O75489 264 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 IGFBP4P22692 258 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 ALDH3A1P30838 453 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 GDI1P31150 447 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 GJA4P35212 333 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 LTBRP36941 435 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 POLR2LP62875 67 aaKnown RBP10.99□□□□□ -0.65
SCG3-202ENST00000542355 XIAPP98170 497 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 GRIN2CQ14957 1233 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 TYSND1Q2T9J0 566 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 FAM151BQ6UXP7 276 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 TPRG1Q6ZUI0 275 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 USP45Q70EL2 814 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 TAS2R42Q7RTR8 314 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 OTOAQ7RTW8 1153 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 CENPLQ8N0S6 344 aaPredicted RBP10.99□□□□□ -0.65
SCG3-202ENST00000542355 DEPDC4Q8N2C3 294 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 CCDC197Q8NCU1 140 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 ELSPBP1Q96BH3 223 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 NXNL1Q96CM4 212 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 GPAMQ9HCL2 828 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 INTS10Q9NVR2 710 aaKnown RBP10.99□□□□□ -0.65
SCG3-202ENST00000542355 LMCD1Q9NZU5 365 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 SIRPGQ9P1W8 387 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 CPSF2Q9P2I0 782 aaKnown RBP10.99□□□□□ -0.65
SCG3-202ENST00000542355 COPG2Q9UBF2 871 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 PPIL1Q9Y3C6 166 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 MTCH2Q9Y6C9 303 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 SLC30A1Q9Y6M5 507 aa10.99□□□□□ -0.65
SCG3-202ENST00000542355 UNC80Q8N2C7 3258 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 PRRC2BQ5JSZ5 2229 aaKnown RBP10.98□□□□□ -0.65
SCG3-202ENST00000542355 ICMTO60725 284 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 KLHL2O95198 593 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 CTSLP07711 333 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 COL6A2P12110 1019 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 CPA3P15088 417 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 FMO4P31512 558 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 HNRNPH2P55795 449 aaKnown RBP10.98□□□□□ -0.65
SCG3-202ENST00000542355 DLG1Q12959 904 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 POM121L1PQ3SYA9 428 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 C4orf46Q504U0 113 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 LRRC66Q68CR7 880 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 FAM45BPQ6NSW5 357 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 ZCCHC23Q6ZST2 131 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 SPATA21Q7Z572 469 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 TBC1D1Q86TI0 1168 aaPredicted RBP10.98□□□□□ -0.65
SCG3-202ENST00000542355 C10orf107Q8IVU9 208 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 TRIM42Q8IWZ5 723 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 PPP1R14CQ8TAE6 165 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 FAM45AQ8TCE6 357 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 FAM136AQ96C01 138 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 GRAMD1AQ96CP6 724 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 TSPAN17Q96FV3 270 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 SCYL1Q96KG9 808 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 LYSMD1Q96S90 227 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 TCF12Q99081 682 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms