RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 CTPS1P17812 591 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 GPR1P46091 355 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 STC1P52823 247 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 RHDQ02161 417 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 DSC2Q02487 901 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 GBE1Q04446 702 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 ZFP36L1Q07352 338 aaKnown RBP15.58■□□□□ 0.08
VPS33A-206ENST00000542310 ITKQ08881 620 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 SKOR2Q2VWA4 1001 aaPredicted RBP15.58■□□□□ 0.08
VPS33A-206ENST00000542310 ATP13A4Q4VNC1 1196 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 RAB11FIP2Q7L804 512 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 NRROSQ86YC3 692 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 CPNE8Q86YQ8 564 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 CCDC13Q8IYE1 715 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 FBXO39Q8N4B4 442 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 PQLC3Q8N755 202 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 ARRDC2Q8TBH0 407 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 ZDHHC1Q8WTX9 485 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 SLC39A7Q92504 469 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 AP2M1Q96CW1 435 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 GOLGA6AQ9NYA3 693 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 DTLQ9NZJ0 730 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 TAAR2Q9P1P5 351 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 LRIT1Q9P2V4 623 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 MGAQ8IWI9 3026 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 PMS2P1A4D2B8 440 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 MTA2O94776 668 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 KDELR1P24390 212 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 UGT1A5P35504 534 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 ARHGAP25P42331 645 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 GNPDA1P46926 289 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 PTSQ03393 145 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 PPIDQ08752 370 aaKnown RBP15.57■□□□□ 0.08
VPS33A-206ENST00000542310 SLITRK4Q8IW52 837 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 RHOT2Q8IXI1 618 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 WBP1Q96G27 269 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 RNF157Q96PX1 679 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 OR2M4Q96R27 311 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 FOXP3Q9BZS1 431 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 ABCG8Q9H221 673 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 PCDH9Q9HC56 1237 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 ABHD10Q9NUJ1 306 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 TTLL3Q9Y4R7 772 aa15.57■□□□□ 0.08
VPS33A-206ENST00000542310 AHCTF1Q8WYP5 2266 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 ATMQ13315 3056 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 AKR1B10O60218 316 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 MFAP3LO75121 409 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 MAP3K6O95382 1288 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 PRLP01236 227 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 FUCA1P04066 466 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 FGF1P05230 155 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 ADCY8P40145 1251 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 GPR3P46089 330 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 IFI35P80217 286 aaPredicted RBP15.56■□□□□ 0.08
VPS33A-206ENST00000542310 B4GALNT1Q00973 533 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 VAC14Q08AM6 782 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 LRP8Q14114 963 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 IHHQ14623 411 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 MAP9Q49MG5 647 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 ZFYVE27Q5T4F4 411 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 SLC9A4Q6AI14 798 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 FOXR1Q6PIV2 292 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 VSTM4Q8IW00 320 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 PLD5Q8N7P1 536 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 COX14Q96I36 57 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 ANP32EQ9BTT0 268 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 B3GNT4Q9C0J1 378 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 SPATS2LQ9NUQ6 558 aaKnown RBP15.56■□□□□ 0.08
VPS33A-206ENST00000542310 VPS18Q9P253 973 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 CHKBQ9Y259 395 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 LOXL2Q9Y4K0 774 aa15.56■□□□□ 0.08
VPS33A-206ENST00000542310 LRRD1A4D1F6 860 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 RGSL1A5PLK6 1076 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 RHPN2P1A8MT19 583 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 NVLO15381 856 aaKnown RBP15.55■□□□□ 0.08
VPS33A-206ENST00000542310 CPNE6O95741 557 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 JMJD7P0C870 316 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 ZFXP17010 805 aaPredicted RBP15.55■□□□□ 0.08
VPS33A-206ENST00000542310 AK4P27144 223 aaPredicted RBP15.55■□□□□ 0.08
VPS33A-206ENST00000542310 MAZP56270 477 aaKnown RBP15.55■□□□□ 0.08
VPS33A-206ENST00000542310 CTBSQ01459 385 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 NIPAL4Q0D2K0 466 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 SLC10A2Q12908 348 aaPredicted RBP15.55■□□□□ 0.08
VPS33A-206ENST00000542310 CLN3Q13286 438 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 MESDQ14696 234 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 PTPRRQ15256 657 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 SLC14A2Q15849 920 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 LRRC38Q5VT99 294 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 SLC30A9Q6PML9 568 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 SFTPA2Q8IWL1 248 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 Q8N9G6 341 aaPredicted RBP15.55■□□□□ 0.08
VPS33A-206ENST00000542310 CCNYQ8ND76 341 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 LPCAT1Q8NF37 534 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 EXD1Q8NHP7 514 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 SLC35G2Q8TBE7 412 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.55■□□□□ 0.08
VPS33A-206ENST00000542310 RAPGEF5Q92565 580 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 CMKLR1Q99788 373 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 CPNE5Q9HCH3 593 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 CD84Q9UIB8 345 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms