RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 PPM1DO15297 605 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 NUDT21O43809 227 aaKnown RBP19.81■□□□□ 0.76
DDX11-220ENST00000542244 SERPING1P05155 500 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 PNLIPP16233 465 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 MPSTP25325 297 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 ALDH4A1P30038 563 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 MLLT3P42568 568 aaPredicted RBP19.81■□□□□ 0.76
DDX11-220ENST00000542244 ARSDP51689 593 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 MAPK10P53779 464 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 ITKQ08881 620 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 GALNT2Q10471 571 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 CCDC122Q5T0U0 273 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 PHF19Q5T6S3 580 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 ZNF438Q7Z4V0 828 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 ZNF605Q86T29 641 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 PQLC3Q8N755 202 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 EXD3Q8N9H8 876 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 ARRDC2Q8TBH0 407 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 MAML1Q92585 1016 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 WDR24Q96S15 920 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 CCNL2Q96S94 520 aaPredicted RBP19.81■□□□□ 0.76
DDX11-220ENST00000542244 TMEM9Q9P0T7 183 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 CAPN11Q9UMQ6 739 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 CHKBQ9Y259 395 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 PRKAB1Q9Y478 270 aa19.81■□□□□ 0.76
DDX11-220ENST00000542244 TRBV23OR9-2A0A075B6M9 112 aa19.8■□□□□ 0.76
DDX11-220ENST00000542244 JMJD7P0C870 316 aa19.8■□□□□ 0.76
DDX11-220ENST00000542244 CYP2A6P11509 494 aaPredicted RBP19.8■□□□□ 0.76
DDX11-220ENST00000542244 CD1CP29017 333 aa19.8■□□□□ 0.76
DDX11-220ENST00000542244 GARSP41250 739 aaKnown RBP19.8■□□□□ 0.76
DDX11-220ENST00000542244 UBASH3AP57075 661 aa19.8■□□□□ 0.76
DDX11-220ENST00000542244 ZBED6P86452 979 aa19.8■□□□□ 0.76
DDX11-220ENST00000542244 GBE1Q04446 702 aa19.8■□□□□ 0.76
DDX11-220ENST00000542244 EIF3IQ13347 325 aaKnown RBP19.8■□□□□ 0.76
DDX11-220ENST00000542244 PAFAH1B3Q15102 231 aaKnown RBP19.8■□□□□ 0.76
DDX11-220ENST00000542244 LINC00303Q3SY05 128 aa19.8■□□□□ 0.76
DDX11-220ENST00000542244 ALKBH5Q6P6C2 394 aaKnown RBP19.8■□□□□ 0.76
DDX11-220ENST00000542244 ZNF761Q86XN6 746 aaPredicted RBP19.8■□□□□ 0.76
DDX11-220ENST00000542244 SYN2Q92777 582 aaPredicted RBP19.8■□□□□ 0.76
DDX11-220ENST00000542244 CCDC97Q96F63 343 aaPredicted RBP19.8■□□□□ 0.76
DDX11-220ENST00000542244 TRNAU1APQ9NX07 287 aaKnown RBP19.8■□□□□ 0.76
DDX11-220ENST00000542244 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.8■□□□□ 0.76
DDX11-220ENST00000542244 PSMD11O00231 422 aa19.79■□□□□ 0.76
DDX11-220ENST00000542244 INPP4BO15327 924 aa19.79■□□□□ 0.76
DDX11-220ENST00000542244 HLA-DQB2P05538 268 aa19.79■□□□□ 0.76
DDX11-220ENST00000542244 CSF2RBP32927 897 aa19.79■□□□□ 0.76
DDX11-220ENST00000542244 GPR1P46091 355 aa19.79■□□□□ 0.76
DDX11-220ENST00000542244 DPTQ07507 201 aa19.79■□□□□ 0.76
DDX11-220ENST00000542244 MAP9Q49MG5 647 aa19.79■□□□□ 0.76
DDX11-220ENST00000542244 ANKRD20A8PQ5CZ79 823 aa19.79■□□□□ 0.76
DDX11-220ENST00000542244 USP45Q70EL2 814 aa19.79■□□□□ 0.76
DDX11-220ENST00000542244 JPH3Q8WXH2 748 aaPredicted RBP19.79■□□□□ 0.76
DDX11-220ENST00000542244 AP2M1Q96CW1 435 aa19.79■□□□□ 0.76
DDX11-220ENST00000542244 SCARF2Q96GP6 870 aaPredicted RBP19.79■□□□□ 0.76
DDX11-220ENST00000542244 RIOK2Q9BVS4 552 aaKnown RBP19.79■□□□□ 0.76
DDX11-220ENST00000542244 GSDMCQ9BYG8 508 aa19.79■□□□□ 0.76
DDX11-220ENST00000542244 RBM22Q9NW64 420 aaKnown RBP eCLIP19.79■□□□□ 0.76
DDX11-220ENST00000542244 IFNKQ9P0W0 207 aa19.79■□□□□ 0.76
DDX11-220ENST00000542244 ACSL6Q9UKU0 697 aa19.79■□□□□ 0.76
DDX11-220ENST00000542244 CNOT6Q9ULM6 557 aaKnown RBP19.79■□□□□ 0.76
DDX11-220ENST00000542244 OAS3Q9Y6K5 1087 aaKnown RBP19.79■□□□□ 0.76
DDX11-220ENST00000542244 IGHV5-10-1A0A0J9YXX1 117 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 A0A0J9YYE9 177 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 A0A1W2PQ67 120 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 PDE2AO00408 941 aaPredicted RBP19.78■□□□□ 0.76
DDX11-220ENST00000542244 NVLO15381 856 aaKnown RBP19.78■□□□□ 0.76
DDX11-220ENST00000542244 CLDN7O95471 211 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 TRBC1P01850 177 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 IVLP07476 585 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 CASP14P31944 242 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 SERPINB6P35237 376 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 STC1P52823 247 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 CYP4F2P78329 520 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 ILF3Q12906 894 aaKnown RBP eCLIP19.78■□□□□ 0.76
DDX11-220ENST00000542244 NR1D2Q14995 579 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 ALG1LQ6GMV1 187 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 ADAMTSL4Q6UY14 1074 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 BBS5Q8N3I7 341 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 ZNF564Q8TBZ8 553 aaPredicted RBP19.78■□□□□ 0.76
DDX11-220ENST00000542244 KIAA1524Q8TCG1 905 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 NSMCE1Q8WV22 266 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 WBP1Q96G27 269 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 CCDC74BQ96LY2 380 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 TDRD1Q9BXT4 1180 aaKnown RBP19.78■□□□□ 0.76
DDX11-220ENST00000542244 BRD8Q9H0E9 1235 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 TTLL3Q9Y4R7 772 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 BZW2Q9Y6E2 419 aaKnown RBP19.78■□□□□ 0.76
DDX11-220ENST00000542244 TENM4Q6N022 2769 aa19.78■□□□□ 0.76
DDX11-220ENST00000542244 AHCTF1Q8WYP5 2266 aa19.77■□□□□ 0.76
DDX11-220ENST00000542244 RHPN2P1A8MT19 583 aa19.77■□□□□ 0.76
DDX11-220ENST00000542244 TMX2-CTNND1H3BSU7 103 aa19.77■□□□□ 0.76
DDX11-220ENST00000542244 MYO1FO00160 1098 aa19.77■□□□□ 0.76
DDX11-220ENST00000542244 MATN3O15232 486 aa19.77■□□□□ 0.76
DDX11-220ENST00000542244 PROSCO94903 275 aa19.77■□□□□ 0.76
DDX11-220ENST00000542244 ATP1A1P05023 1023 aaKnown RBP19.77■□□□□ 0.76
DDX11-220ENST00000542244 MMP2P08253 660 aa19.77■□□□□ 0.76
DDX11-220ENST00000542244 TEAD1P28347 426 aa19.77■□□□□ 0.76
DDX11-220ENST00000542244 ACTR1BP42025 376 aa19.77■□□□□ 0.76
DDX11-220ENST00000542244 ACTR1AP61163 376 aa19.77■□□□□ 0.76
DDX11-220ENST00000542244 TSR1Q2NL82 804 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms