RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 WDR92Q96MX6 357 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 TMEM121Q9BTD3 319 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 SCNM1Q9BWG6 230 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 TMEM168Q9H0V1 697 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 GBA3Q9H227 469 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 FTSJ1Q9UET6 329 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 APOBEC3BQ9UH17 382 aaKnown RBP9.7□□□□□ -0.86
YBX3-212ENST00000542002 RSPH14Q9UHP6 348 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 KLK13Q9UKR3 277 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 TMPRSS11EQ9UL52 423 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 TMEM98Q9Y2Y6 226 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 CSNK1G3Q9Y6M4 447 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 LRRK1Q38SD2 2015 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 NCOR2Q9Y618 2525 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 CNOT1A5YKK6 2376 aaKnown RBP9.69□□□□□ -0.86
YBX3-212ENST00000542002 GOLGA6CA6NDK9 693 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 GOLGA6BA6NDN3 693 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 USP27XA6NNY8 438 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 FADS2P1A8MWK0 482 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 CACNB4O00305 520 aaPredicted RBP9.69□□□□□ -0.86
YBX3-212ENST00000542002 LIASO43766 372 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 GOLGA6DP0CG33 693 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 MYCLP1P12525 358 aaPredicted RBP9.69□□□□□ -0.86
YBX3-212ENST00000542002 BPIP17213 487 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 CKMT2P17540 419 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 CA4P22748 312 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 NFKBIAP25963 317 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 PSMB4P28070 264 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 HTR1BP28222 390 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 TEAD1P28347 426 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 GPR1P46091 355 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 ACADVLP49748 655 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 SHC2P98077 582 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 OASLQ15646 514 aaKnown RBP9.69□□□□□ -0.86
YBX3-212ENST00000542002 CCDC157Q569K6 752 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 ZNF648Q5T619 568 aaPredicted RBP9.69□□□□□ -0.86
YBX3-212ENST00000542002 HENMT1Q5T8I9 393 aaKnown RBP9.69□□□□□ -0.86
YBX3-212ENST00000542002 RAET1GQ6H3X3 334 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 DENND5AQ6IQ26 1287 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 DHRS13Q6UX07 377 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 ADAMTSL4Q6UY14 1074 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 MICALCLQ6ZW33 695 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 ZNF765Q7L2R6 523 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 NRROSQ86YC3 692 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 KLHDC8BQ8IXV7 354 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 NRSN1Q8IZ57 195 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 TTC30BQ8N4P2 665 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 GLIS1Q8NBF1 620 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 IPMKQ8NFU5 416 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 BTN2A2Q8WVV5 523 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 ADAMTS14Q8WXS8 1223 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 COX14Q96I36 57 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 SPATA13Q96N96 652 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 APOL2Q9BQE5 337 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 FRMD8Q9BZ67 464 aaPredicted RBP9.69□□□□□ -0.86
YBX3-212ENST00000542002 SLC13A1Q9BZW2 595 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 FAM83DQ9H4H8 585 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 WDR26Q9H7D7 661 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 ZFYVE1Q9HBF4 777 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 CYP4F12Q9HCS2 524 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 BPIFA1Q9NP55 256 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 TRMT1Q9NXH9 659 aaKnown RBP9.69□□□□□ -0.86
YBX3-212ENST00000542002 GOLGA6AQ9NYA3 693 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 NLGN3Q9NZ94 848 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 SPASTQ9UBP0 616 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 KLQ9UEF7 1012 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 SLC17A4Q9Y2C5 497 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 ZNF711Q9Y462 761 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 PLEKHM1Q9Y4G2 1056 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 CABIN1Q9Y6J0 2220 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 OAS3Q9Y6K5 1087 aaKnown RBP9.69□□□□□ -0.86
YBX3-212ENST00000542002 DGKBQ9Y6T7 804 aa9.69□□□□□ -0.86
YBX3-212ENST00000542002 ANKRD36A6QL64 1941 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 PRSS38A1L453 326 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 FAM221BA6H8Z2 402 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 NEMP2A6NFY4 417 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 LMO7DNF2Z398 122 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 H3BM21 787 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 TNFRSF10CO14798 259 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 INPP4BO15327 924 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 BUD23O43709 281 aaKnown RBP9.68□□□□□ -0.86
YBX3-212ENST00000542002 USP12O75317 370 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 RASGRP1O95267 797 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 TNFP01375 233 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 ATP1A1P05023 1023 aaKnown RBP9.68□□□□□ -0.86
YBX3-212ENST00000542002 CKMT1AP12532 417 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 ETS1P14921 441 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 ACP1P24666 158 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 MPP3Q13368 585 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 SNX1Q13596 522 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 KCTD11Q693B1 232 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 RAVER1Q8IY67 606 aaKnown RBP9.68□□□□□ -0.86
YBX3-212ENST00000542002 TAB3Q8N5C8 712 aaPredicted RBP9.68□□□□□ -0.86
YBX3-212ENST00000542002 FAM181AQ8N9Y4 354 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 TTC13Q8NBP0 860 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 TRIM58Q8NG06 486 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 RTP4Q96DX8 246 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 SCARF2Q96GP6 870 aaPredicted RBP9.68□□□□□ -0.86
YBX3-212ENST00000542002 MS4A14Q96JA4 679 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 HIC2Q96JB3 615 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms