RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 TMLHEQ9NVH6 421 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 STK39Q9UEW8 545 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 ASCC3Q8N3C0 2202 aaKnown RBP16.08■□□□□ 0.16
VARS2-212ENST00000542001 A8MT66 165 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 SNAP91O60641 907 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 TACR2P21452 398 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 HNF4AP41235 474 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 TMEM214Q6NUQ4 689 aaKnown RBP16.08■□□□□ 0.16
VARS2-212ENST00000542001 RASAL3Q86YV0 1011 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 TTC9BQ8N6N2 239 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 UTP15Q8TED0 518 aaKnown RBP16.08■□□□□ 0.16
VARS2-212ENST00000542001 CANT1Q8WVQ1 401 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 GLMNQ92990 594 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 SLC45A3Q96JT2 553 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 ACAT2Q9BWD1 397 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 SPATA16Q9BXB7 569 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 MOCS1Q9NZB8 636 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 GALPQ9UBC7 116 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 CD84Q9UIB8 345 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 RPL26L1Q9UNX3 145 aaKnown RBP16.08■□□□□ 0.16
VARS2-212ENST00000542001 RPL5P46777 297 aaKnown RBP16.07■□□□□ 0.16
VARS2-212ENST00000542001 YAP1P46937 504 aaKnown RBP16.07■□□□□ 0.16
VARS2-212ENST00000542001 GSCP56915 257 aaPredicted RBP16.07■□□□□ 0.16
VARS2-212ENST00000542001 ST8SIA6P61647 398 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 MAPKAPK3Q16644 382 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 REP15Q6BDI9 236 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 EFL1Q7Z2Z2 1120 aaKnown RBP16.07■□□□□ 0.16
VARS2-212ENST00000542001 OR10T2Q8NGX3 314 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 SLC9A7Q96T83 725 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 ATG10Q9H0Y0 220 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 DYRK4Q9NR20 520 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 FAM32AQ9Y421 112 aaKnown RBP16.07■□□□□ 0.16
VARS2-212ENST00000542001 TRIM17Q9Y577 477 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 SF3B1O75533 1304 aaKnown RBP eCLIP16.07■□□□□ 0.165e-6■■■■■ 137.9
VARS2-212ENST00000542001 ARID1BQ8NFD5 2236 aaPredicted RBP16.07■□□□□ 0.16
VARS2-212ENST00000542001 ITPKAP23677 461 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 ALDH9A1P49189 494 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 EPHB3P54753 998 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 CASP9P55211 416 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 FAM98BQ52LJ0 330 aaKnown RBP16.07■□□□□ 0.16
VARS2-212ENST00000542001 ZNF697Q5TEC3 545 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 PLD3Q8IV08 490 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 ZNF276Q8N554 614 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 CNTD1Q8N815 330 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 C3orf58Q8NDZ4 430 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 PTCD3Q96EY7 689 aaKnown RBP16.07■□□□□ 0.16
VARS2-212ENST00000542001 PKP2Q99959 881 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 ARHGAP39Q9C0H5 1083 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 STN1Q9H668 368 aaKnown RBP16.07■□□□□ 0.16
VARS2-212ENST00000542001 PRPF19Q9UMS4 504 aaKnown RBP16.07■□□□□ 0.16
VARS2-212ENST00000542001 EP400Q96L91 3159 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 A0A0D9SEW6 157 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 DEAF1O75398 565 aaPredicted RBP16.07■□□□□ 0.16
VARS2-212ENST00000542001 PRKG2Q13237 762 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 SLC24A5Q71RS6 500 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 PGAM4Q8N0Y7 254 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 FOPNLQ96NB1 174 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 KCNK13Q9HB14 408 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 GDAP2Q9NXN4 497 aa16.07■□□□□ 0.16
VARS2-212ENST00000542001 CDC7O00311 574 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 MGEA5O60502 916 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 CLCQ05315 142 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 ABRQ12979 859 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 HNRNPDQ14103 355 aaKnown RBP16.06■□□□□ 0.16
VARS2-212ENST00000542001 LDLRAP1Q5SW96 308 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 ZDHHC13Q8IUH4 622 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 NSUN5Q96P11 429 aaKnown RBP16.06■□□□□ 0.16
VARS2-212ENST00000542001 BDH2Q9BUT1 245 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 CACYBPQ9HB71 228 aaKnown RBP16.06■□□□□ 0.16
VARS2-212ENST00000542001 TBC1D23Q9NUY8 699 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 MTMR10Q9NXD2 777 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 C6orf203Q9P0P8 240 aaPredicted RBP16.06■□□□□ 0.16
VARS2-212ENST00000542001 SNX8Q9Y5X2 465 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 C16orf96A6NNT2 1141 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 ULK1O75385 1050 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 GPR32O75388 356 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 RHOQP17081 205 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 MTPNP58546 118 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 LRRTM3Q86VH5 581 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 PYCR2Q96C36 320 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 PCDH12Q9NPG4 1184 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 DOCK2Q92608 1830 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 MGAT4DA6NG13 374 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 TRAFD1O14545 582 aaPredicted RBP16.06■□□□□ 0.16
VARS2-212ENST00000542001 FGF1P05230 155 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 PKMP14618 531 aaKnown RBP16.06■□□□□ 0.16
VARS2-212ENST00000542001 GKP32189 559 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 GDF5P43026 501 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 GNA12Q03113 381 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 DOK6Q6PKX4 331 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 SMIM14Q96QK8 99 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 CORO1BQ9BR76 489 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 OSGEPL1Q9H4B0 414 aa16.06■□□□□ 0.16
VARS2-212ENST00000542001 HMX1Q9NP08 348 aaPredicted RBP16.06■□□□□ 0.16
VARS2-212ENST00000542001 LZTS3O60299 673 aaPredicted RBP16.05■□□□□ 0.16
VARS2-212ENST00000542001 ALPIP09923 528 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 S100A3P33764 101 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 RFX3P48380 749 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 TUFMP49411 452 aaKnown RBP16.05■□□□□ 0.16
VARS2-212ENST00000542001 PURAQ00577 322 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms