RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 RASGRP1O95267 797 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 CPNE6O95741 557 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 MT-CO1P00395 513 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 NR3C1P04150 777 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 RNASE1P07998 156 aaKnown RBP4.65□□□□□ -1.67
SNHG1-214ENST00000540865 PRKAR1AP10644 381 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 VDRP11473 427 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 FGF3P11487 239 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-214ENST00000540865 CTSEP14091 401 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 OAS2P29728 719 aaKnown RBP4.65□□□□□ -1.67
SNHG1-214ENST00000540865 GCLMP48507 274 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 NUMBP49757 651 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 RGS7P49802 495 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 PEX5P50542 639 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 HK3P52790 923 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 COPB1P53618 953 aaKnown RBP4.65□□□□□ -1.67
SNHG1-214ENST00000540865 EGR3Q06889 387 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 PPP3CAQ08209 521 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 TRA2AQ13595 282 aaKnown RBP eCLIP4.65□□□□□ -1.672e-56■■■■□ 20.9
SNHG1-214ENST00000540865 ARHGEF7Q14155 803 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 ANKRD39Q53RE8 183 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 RALGPS1Q5JS13 557 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 KRT39Q6A163 491 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 PMF1Q6P1K2 205 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 LCLAT1Q6UWP7 414 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 DPY19L3Q6ZPD9 716 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 ASB18Q6ZVZ8 466 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 INTS8Q75QN2 995 aaKnown RBP4.65□□□□□ -1.67
SNHG1-214ENST00000540865 TIPARPQ7Z3E1 657 aaKnown RBP4.65□□□□□ -1.67
SNHG1-214ENST00000540865 TMPRSS9Q7Z410 1059 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 TAC4Q86UU9 113 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 PIM3Q86V86 326 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 CIR1Q86X95 450 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-214ENST00000540865 CCDC13Q8IYE1 715 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 POU5F2Q8N7G0 328 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 IQUBQ8NA54 791 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 OR52K2Q8NGK3 314 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 CPT1CQ8TCG5 803 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 TRIM62Q9BVG3 475 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 C1QTNF7Q9BXJ2 289 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 TRIM55Q9BYV6 548 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 ASPSCR1Q9BZE9 553 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 INTS2Q9H0H0 1204 aaKnown RBP4.65□□□□□ -1.67
SNHG1-214ENST00000540865 KCTD10Q9H3F6 313 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 GPN2Q9H9Y4 310 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-214ENST00000540865 TMEM8AQ9HCN3 771 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 SLC39A2Q9NP94 309 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 MBNL3Q9NUK0 354 aaKnown RBP4.65□□□□□ -1.67
SNHG1-214ENST00000540865 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.65□□□□□ -1.67
SNHG1-214ENST00000540865 SLAMF8Q9P0V8 285 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 PILRAQ9UKJ1 303 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 SMC3Q9UQE7 1217 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 TBC1D30Q9Y2I9 924 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 NIPBLQ6KC79 2804 aaeCLIP4.65□□□□□ -1.678e-27■■■■□ 21.5
SNHG1-214ENST00000540865 TACC2O95359 2948 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 TP53BP1Q12888 1972 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 LOC101059948A0A1B0GTJ6 334 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 B4E171 279 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 K7EM74 188 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 K7ERQ8 282 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 NEMP1O14524 444 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 ZW10O43264 779 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 B4GAT1O43505 415 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 SMAD6O43541 496 aaKnown RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 CALUO43852 315 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 LDLRP01130 860 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 IGLV3-25P01717 112 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 TRIM49P0CI25 452 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 TRIM49CP0CI26 452 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 SLC2A3P11169 496 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 KRT13P13646 458 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 CD19P15391 556 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 TCN2P20062 427 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 NR1D1P20393 614 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 RRM1P23921 792 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 HTR1BP28222 390 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 IGFALSP35858 605 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 TSPAN7P41732 249 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 RPL34P49207 117 aaKnown RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 CDH4P55283 916 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 YWHAEP62258 255 aaKnown RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 B4GALNT1Q00973 533 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 SLC20A2Q08357 652 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 ABHD18Q0P651 414 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 MTA1Q13330 715 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 EIF4EBP2Q13542 120 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 HLTFQ14527 1009 aaKnown RBP eCLIP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 SLC39A14Q15043 492 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 TCEAL1Q15170 157 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 STILQ15468 1287 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 CNGA2Q16280 664 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 NFIL3Q16649 462 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 ARHGAP44Q17R89 818 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 ALG11Q2TAA5 492 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 EDRF1Q3B7T1 1238 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 C5orf22Q49AR2 442 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 MAP9Q49MG5 647 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 C14orf28Q4W4Y0 310 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 DCAF12Q5T6F0 453 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 FBXL22Q6P050 247 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms