RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 RBM22Q9NW64 420 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 NUDT5Q9UKK9 219 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 PIN4Q9Y237 131 aaKnown RBP13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 TIMM22Q9Y584 194 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 PCDHA9Q9Y5H5 950 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 BRCA2P51587 3418 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 UBXN8O00124 270 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 RSL1D1O76021 490 aaKnown RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 IL7RP16871 459 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 ZNF12P17014 697 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 DNAJB1P25685 340 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 KPNA2P52292 529 aaKnown RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 CCNA1P78396 465 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 BTG3Q14201 252 aaPredicted RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 ANKRD34AQ69YU3 496 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 BHLHA9Q7RTU4 235 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 IGFN1Q86VF2 1251 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 MINDY1Q8N5J2 469 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 PTGR2Q8N8N7 351 aaPredicted RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 OR13F1Q8NGS4 319 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 TMEM125Q96AQ2 219 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 MPHOSPH6Q99547 160 aaKnown RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 HOPXQ9BPY8 73 aaPredicted RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 NEU3Q9UQ49 428 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 VWA7Q9Y334 891 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 MEIS3P2A8K0S8 358 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 AFF1P51825 1210 aaKnown RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 LIPEQ05469 1076 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 IHHQ14623 411 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 ACAP2Q15057 778 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 INTS6LQ5JSJ4 861 aaKnown RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 NOL9Q5SY16 702 aaKnown RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 XAF1Q6GPH4 301 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 TAPT1Q6NXT6 567 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 RANBP10Q6VN20 620 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 MOB2Q70IA6 237 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 CLYBLQ8N0X4 340 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 DQX1Q8TE96 717 aaKnown RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 CHPT1Q8WUD6 406 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 RSPH1Q8WYR4 309 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 ZNF560Q96MR9 790 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 RNF145Q96MT1 663 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 SLC52A3Q9NQ40 469 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 INTS7Q9NVH2 962 aaKnown RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 MPP6Q9NZW5 540 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 POLG2Q9UHN1 485 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 ST14Q9Y5Y6 855 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 TRIM64BA6NI03 449 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 CFAP99D6REC4 459 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 SNAP91O60641 907 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 ZBTB7AO95365 584 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 RBP1P09455 135 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 CDH3P22223 829 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 IDUAP35475 653 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 OXCT1P55809 520 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 NFYCQ13952 458 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 RPS6KA2Q15349 733 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 KIAA0930Q6ICG6 404 aaPredicted RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 NOTUMQ6P988 496 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 RALGPS2Q86X27 583 aaPredicted RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 KIAA2013Q8IYS2 634 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 ZNF513Q8N8E2 541 aaPredicted RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 OR13J1Q8NGT2 312 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 CCDC126Q96EE4 140 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 ABHD8Q96I13 439 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 KCTD14Q9BQ13 255 aaPredicted RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 YIPF2Q9BWQ6 316 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 TRIM15Q9C019 465 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 ADNPQ9H2P0 1102 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 PKD2L2Q9NZM6 624 aa13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 OAS3Q9Y6K5 1087 aaKnown RBP13.9□□□□□ -0.18
SCNN1A-215ENST00000540037 XYLBO75191 536 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 GPR32O75388 356 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 ANXA9O76027 345 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 BCL10O95999 233 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 CD4P01730 458 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 POLD2P49005 469 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 HLCSP50747 726 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 IST1P53990 364 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 WNT3AP56704 352 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 ADARB1P78563 741 aaKnown RBP13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 OR4D1Q15615 310 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 HABP4Q5JVS0 413 aaKnown RBP13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 USP51Q70EK9 711 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 LIMS2Q7Z4I7 341 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 ANKRD13AQ8IZ07 590 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 DCBLD1Q8N8Z6 715 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 PIM2Q9P1W9 311 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 TRIM17Q9Y577 477 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 SOBPA7XYQ1 873 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 TOR1BO14657 336 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 MSI1O43347 362 aaKnown RBP13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 GJB3O75712 270 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 PAMP19021 973 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 PRDX3P30048 256 aaKnown RBP13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 PGFP49763 221 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 HERVK_113P63132 956 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 PLIN5Q00G26 463 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 PPP1R8Q12972 351 aaKnown RBP13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 SPCS2Q15005 226 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms