RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 PRKCSHP14314 528 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 VIPR1P32241 457 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 HTR7P34969 479 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 ETV3P41162 512 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 AP1S1P61966 158 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 CDR2Q01850 454 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 PTP4A2Q12974 167 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 ERV3-1Q14264 604 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 RFTN1Q14699 578 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 PYCR3Q53H96 274 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 MIIPQ5JXC2 388 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 DENND2CQ68D51 928 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 RAET1GQ6H3X3 334 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 HSD11B1LQ7Z5J1 315 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 SLC37A2Q8TED4 501 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 SLC20A1Q8WUM9 679 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 DTD2Q96FN9 168 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 CELF6Q96J87 481 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 OR2M4Q96R27 311 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 SELENOOQ9BVL4 669 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 TLK1Q9UKI8 766 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 POLHQ9Y253 713 aa11.57□□□□□ -0.56
CLSTN3-209ENST00000539982 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 GOLGA6CA6NDK9 693 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 GOLGA6BA6NDN3 693 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 SIGLEC16A6NMB1 481 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 PSMD11O00231 422 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 CCP110O43303 1012 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 HTRA2O43464 458 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 SEMA7AO75326 666 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 RFPL1O75677 317 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 RECKO95980 971 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 FURINP09958 794 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 GOLGA6DP0CG33 693 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 UNGP13051 313 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 CHRNB2P17787 502 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 NFKBIAP25963 317 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 DLSTP36957 453 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 RENBPP51606 427 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 ZNF143P52747 638 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 GSCP56915 257 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 TPI1P60174 286 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 FMO1Q01740 532 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 DPTQ07507 201 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 LRP8Q14114 963 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 DOK6Q6PKX4 331 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 C6orf15Q6UXA7 325 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 Q6ZVL8 140 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 FAM114A1Q8IWE2 563 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 LZTR1Q8N653 840 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 CPT1CQ8TCG5 803 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 SH3KBP1Q96B97 665 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 PSKH2Q96QS6 385 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 TUBGCP2Q9BSJ2 902 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 SARS2Q9NP81 518 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 GOLGA6AQ9NYA3 693 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 ADAM22Q9P0K1 906 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 TMEM98Q9Y2Y6 226 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 PCDHGC4Q9Y5F7 938 aa11.56□□□□□ -0.56
CLSTN3-209ENST00000539982 INPP4BO15327 924 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 GFPT2O94808 682 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 MAP3K6O95382 1288 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 EML2O95834 649 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 DDAH2O95865 285 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 PDGFAP04085 211 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 CYP2A6P11509 494 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 GPR1P46091 355 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 PMS2P54278 862 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 EPHA4P54764 986 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 HHEXQ03014 270 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 IL10RBQ08334 325 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 TPD52L1Q16890 204 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 TRIM72Q6ZMU5 477 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 TECPR1Q7Z6L1 1165 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 APLFQ8IW19 511 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 C3orf20Q8ND61 904 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 ULBP3Q9BZM4 244 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 SP110Q9HB58 689 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 KIAA1468Q9P260 1216 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 KLHL3Q9UH77 587 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 KCND3Q9UK17 655 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 CROTQ9UKG9 612 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 PHTF1Q9UMS5 762 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 MAP4K5Q9Y4K4 846 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 CELSR2Q9HCU4 2923 aa11.55□□□□□ -0.56
CLSTN3-209ENST00000539982 TTC24A2A3L6 582 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 CDC14CA4D256 554 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 ANKRD62A6NC57 917 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 SOCS5O75159 536 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 KATNA1O75449 491 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 SOD1P00441 154 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 CALB1P05937 261 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 ANKRD34CP0C6C1 535 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 RNF224P0DH78 156 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 ZNF28P17035 718 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 LHCGRP22888 699 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 NSFP46459 744 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 FOXM1Q08050 763 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 NFATC2Q13469 925 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms