RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 ITM2AO43736 263 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 DLX3O60479 287 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 IPO13O94829 963 aaKnown RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 NFATC1O95644 943 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 SBK3P0C264 359 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 PKMP14618 531 aaKnown RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 ZNF37AP17032 561 aaPredicted RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 NFKB2Q00653 900 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 GALNT1Q10472 559 aaPredicted RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 DLG1Q12959 904 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 SEMA3AQ14563 771 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 ZNF460Q14592 562 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 DHCR24Q15392 516 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 ACCSLQ4AC99 568 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 ZNF549Q6P9A3 640 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 BRAT1Q6PJG6 821 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 LYSMD3Q7Z3D4 306 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 RBM23Q86U06 439 aaKnown RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 LDB1Q86U70 411 aaPredicted RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 ADIPOR2Q86V24 386 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 RIN3Q8TB24 985 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 HCAR2Q8TDS4 363 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 KCNJ9Q92806 393 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 KLHL29Q96CT2 875 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 FAR2Q96K12 515 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 ZSWIM3Q96MP5 696 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 OSBPL1AQ9BXW6 950 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 C20orf27Q9GZN8 174 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 ZMYND15Q9H091 742 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 CDH19Q9H159 772 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 TNKS2Q9H2K2 1166 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 LINC00597Q9H2U6 94 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 EML4Q9HC35 981 aaKnown RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 SLC27A6Q9Y2P4 619 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 WNT6Q9Y6F9 365 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 C1orf232A0A0U1RR37 186 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 SMIM24O75264 130 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 PIGNO95427 931 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 SLC4A1P02730 911 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 SERPINA6P08185 405 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 TPBGLP0DKB5 382 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 ADH5P11766 374 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 ZNF7P17097 686 aaPredicted RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 SERPINB3P29508 390 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 MAGEA10P43363 369 aaPredicted RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 NRIP1P48552 1158 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 CCNHP51946 323 aaPredicted RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 NCALDP61601 193 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 XIAPP98170 497 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 PEX6Q13608 980 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 METTL21CQ5VZV1 264 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 SNX20Q7Z614 316 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 SPRED2Q7Z698 418 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 BPIFB1Q8TDL5 484 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 ING5Q8WYH8 240 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 SMARCD2Q92925 531 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 RPL10LQ96L21 214 aaKnown RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 RILPQ96NA2 401 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 ASB2Q96Q27 587 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 RAB3IPQ96QF0 476 aaPredicted RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 MCCC1Q96RQ3 725 aaPredicted RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 DERL2Q9GZP9 239 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 MRGBPQ9NV56 204 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 THG1LQ9NWX6 298 aaKnown RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 ERVW-1Q9UQF0 538 aa17.1■□□□□ 0.33
LTBR-207ENST00000539925 YBX2Q9Y2T7 364 aaKnown RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 OAS3Q9Y6K5 1087 aaKnown RBP17.1■□□□□ 0.33
LTBR-207ENST00000539925 NOTCH4Q99466 2003 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 SYCE1LA8MT33 242 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 PRMT5O14744 637 aaPredicted RBP17.09■□□□□ 0.33
LTBR-207ENST00000539925 LYPLA1O75608 230 aaPredicted RBP17.09■□□□□ 0.33
LTBR-207ENST00000539925 KITP10721 976 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 TFEBP19484 476 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 RPS3P23396 243 aaKnown RBP eCLIP17.09■□□□□ 0.33
LTBR-207ENST00000539925 FSHRP23945 695 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 CTSOP43234 321 aaPredicted RBP17.09■□□□□ 0.33
LTBR-207ENST00000539925 STK19P49842 368 aaPredicted RBP17.09■□□□□ 0.33
LTBR-207ENST00000539925 NAGLUP54802 743 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 PDGFRLQ15198 375 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 PTPRNQ16849 979 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 SPRED3Q2MJR0 410 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 ASTLQ6HA08 431 aaPredicted RBP17.09■□□□□ 0.33
LTBR-207ENST00000539925 FAM109BQ6ICB4 259 aaPredicted RBP17.09■□□□□ 0.33
LTBR-207ENST00000539925 RAB44Q7Z6P3 723 aaPredicted RBP17.09■□□□□ 0.33
LTBR-207ENST00000539925 ADGRD2Q7Z7M1 963 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 C10orf67Q8IYJ2 551 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 KDM1BQ8NB78 822 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 OR6K2Q8NGY2 324 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 ITFG1Q8TB96 612 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 GRIN3AQ8TCU5 1115 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 TMEM237Q96Q45 408 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 TRPV4Q9HBA0 871 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 RAD18Q9NS91 495 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 LNPEPQ9UIQ6 1025 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 ANKRD36A6QL64 1941 aa17.09■□□□□ 0.33
LTBR-207ENST00000539925 FCHO1O14526 889 aa17.08■□□□□ 0.32
LTBR-207ENST00000539925 ZNF30P17039 623 aa17.08■□□□□ 0.32
LTBR-207ENST00000539925 CTPS1P17812 591 aa17.08■□□□□ 0.32
LTBR-207ENST00000539925 HNF1BP35680 557 aa17.08■□□□□ 0.32
LTBR-207ENST00000539925 GMPRP36959 345 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms