RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 PTAR1Q7Z6K3 402 aaPredicted RBP17.08■□□□□ 0.33
PCDHB17P-201ENST00000539533 ST13P5Q8NFI4 369 aaPredicted RBP17.08■□□□□ 0.33
PCDHB17P-201ENST00000539533 OR6P1Q8NGX9 317 aa17.08■□□□□ 0.33
PCDHB17P-201ENST00000539533 TBATAQ96M53 351 aa17.08■□□□□ 0.33
PCDHB17P-201ENST00000539533 NSMCE4AQ9NXX6 385 aa17.08■□□□□ 0.33
PCDHB17P-201ENST00000539533 TBC1D14Q9P2M4 693 aa17.08■□□□□ 0.33
PCDHB17P-201ENST00000539533 SORCS3Q9UPU3 1222 aa17.08■□□□□ 0.33
PCDHB17P-201ENST00000539533 A0A088AWK7 358 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 OR51F1A6NGY5 319 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 TRIM24O15164 1050 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 TIMM44O43615 452 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 SIN3BO75182 1162 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 FKBP6O75344 327 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 ZNF821O75541 412 aaPredicted RBP17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 BMP1P13497 986 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 VIPR2P41587 438 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 PLK1P53350 603 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 FUT11Q495W5 492 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 NAT16Q8N8M0 369 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 C2CD4AQ8NCU7 369 aaPredicted RBP17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 MDGA1Q8NFP4 955 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 OR13C4Q8NGS5 318 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 ACMSDQ8TDX5 336 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 RSPRY1Q96DX4 576 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 DNAJC1Q96KC8 554 aaKnown RBP17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 TUBGCP5Q96RT8 1024 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 GDF15Q99988 308 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 TNKS2Q9H2K2 1166 aa17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 EVLQ9UI08 416 aaPredicted RBP17.08■□□□□ 0.32
PCDHB17P-201ENST00000539533 ANKRD66B4E2M5 251 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 SAT1P21673 171 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 GKP32189 559 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 ZNF789Q5FWF6 425 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 DGKKQ5KSL6 1271 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 C16orf46Q6P387 395 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 ISL2Q96A47 359 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 DTNBP1Q96EV8 351 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 LMAN2LQ9H0V9 348 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 RHOJQ9H4E5 214 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 ZMYM5Q9UJ78 669 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 FBXO5Q9UKT4 447 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 SLC39A10Q9ULF5 831 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 A0A0U1RQS6 177 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 MAGEA12P43365 314 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 PRAMEP78395 509 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 IRX4P78413 519 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 RARS2Q5T160 578 aaKnown RBP17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 LDB1Q86U70 411 aaPredicted RBP17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 CAMK1DQ8IU85 385 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 PPP1R14CQ8TAE6 165 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 SIKE1Q9BRV8 207 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 SFXN1Q9H9B4 322 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 ZNF358Q9NW07 568 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 PCDHB9Q9Y5E1 797 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 C2orf16Q68DN1 1984 aa17.07■□□□□ 0.32
PCDHB17P-201ENST00000539533 TCF3P15923 654 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 SERPINB8P50452 374 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 TUBB3Q13509 450 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 SLC12A1Q13621 1099 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 FASTKD1Q53R41 847 aaKnown RBP17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 AAGABQ6PD74 315 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 RAPH1Q70E73 1250 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 ADGRG6Q86SQ4 1221 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 WDR75Q8IWA0 830 aaKnown RBP17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 MFSD6LQ8IWD5 586 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 CELF5Q8N6W0 485 aaKnown RBP17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 MYLIPQ8WY64 445 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 PPP2R3CQ969Q6 453 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 GPR22Q99680 433 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 ADGRE3Q9BY15 652 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 S100A14Q9HCY8 104 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 SLC7A4O43246 635 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 GSRP00390 522 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 SLC4A1P02730 911 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 SRCP12931 536 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 SLC25A3Q00325 362 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 ACVR1Q04771 509 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 RAB30Q15771 203 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 UGP2Q16851 508 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 CNPY1Q3B7I2 92 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 CNSTQ6PJW8 725 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 PLD6Q8N2A8 252 aaKnown RBP17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 PIWIL2Q8TC59 973 aaKnown RBP17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 CCDC28BQ9BUN5 200 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 MFSD1Q9H3U5 465 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 MARCH4Q9P2E8 410 aaPredicted RBP17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 EMCNQ9ULC0 261 aa17.06■□□□□ 0.32
PCDHB17P-201ENST00000539533 A0A096LPK6 155 aa17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 ITM2AO43736 263 aa17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 FZD6O60353 706 aa17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 LYPLA1O75608 230 aaPredicted RBP17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 PIGNO95427 931 aa17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 PABPC1P11940 636 aaKnown RBP17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 IRF9Q00978 393 aa17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 DBN1Q16643 649 aa17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 FAM78AQ5JUQ0 283 aa17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 COL13A1Q5TAT6 717 aaPredicted RBP17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 N4BP2L1Q5TBK1 243 aaPredicted RBP17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 MBLAC2Q68D91 279 aa17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 GLT6D1Q7Z4J2 308 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms