RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 TACC1O75410 805 aa4.8□□□□□ -1.64
CCDC7-209ENST00000539197 MT-CYBP00156 380 aaPredicted RBP4.8□□□□□ -1.64
CCDC7-209ENST00000539197 POU1F1P28069 291 aa4.8□□□□□ -1.64
CCDC7-209ENST00000539197 GNB1P62873 340 aa4.8□□□□□ -1.64
CCDC7-209ENST00000539197 ZNF234Q14588 700 aa4.8□□□□□ -1.64
CCDC7-209ENST00000539197 ZNF280DQ6N043 979 aa4.8□□□□□ -1.64
CCDC7-209ENST00000539197 METTL2BQ6P1Q9 378 aaKnown RBP4.8□□□□□ -1.64
CCDC7-209ENST00000539197 FAM171BQ6P995 826 aa4.8□□□□□ -1.64
CCDC7-209ENST00000539197 CPLX2Q6PUV4 134 aaKnown RBP4.8□□□□□ -1.64
CCDC7-209ENST00000539197 C15orf39Q6ZRI6 1047 aa4.8□□□□□ -1.64
CCDC7-209ENST00000539197 GTSCR1Q86UQ5 136 aa4.8□□□□□ -1.64
CCDC7-209ENST00000539197 CCDC146Q8IYE0 955 aa4.8□□□□□ -1.64
CCDC7-209ENST00000539197 STPG4Q8N801 248 aa4.8□□□□□ -1.64
CCDC7-209ENST00000539197 STAMBPL1Q96FJ0 436 aa4.8□□□□□ -1.64
CCDC7-209ENST00000539197 METTL2AQ96IZ6 378 aaKnown RBP4.8□□□□□ -1.64
CCDC7-209ENST00000539197 NDST4Q9H3R1 872 aa4.8□□□□□ -1.64
CCDC7-209ENST00000539197 ZNF624Q9P2J8 865 aaPredicted RBP4.8□□□□□ -1.64
CCDC7-209ENST00000539197 IGLV5-45A0A087WSX0 123 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 TSPAN3O60637 253 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 CAVIN2O95810 425 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 IGHV4-39P01824 125 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 URODP06132 367 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 GALTP07902 379 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 LUMP51884 338 aaPredicted RBP4.79□□□□□ -1.64
CCDC7-209ENST00000539197 EFNB1P98172 346 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 TMTC1Q8IUR5 882 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 TNIP2Q8NFZ5 429 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 HUS1BQ8NHY5 278 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 PIGTQ969N2 578 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 RHBDF1Q96CC6 855 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 LRR1Q96L50 414 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 REEP2Q9BRK0 252 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 DCTN5Q9BTE1 182 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 ITM2CQ9NQX7 267 aa4.79□□□□□ -1.64
CCDC7-209ENST00000539197 CTAGE9A4FU28 777 aa4.78□□□□□ -1.64
CCDC7-209ENST00000539197 KRTAP16-1A8MUX0 517 aa4.78□□□□□ -1.64
CCDC7-209ENST00000539197 HHLA1C9JL84 531 aa4.78□□□□□ -1.64
CCDC7-209ENST00000539197 CTAGE8P0CG41 777 aa4.78□□□□□ -1.64
CCDC7-209ENST00000539197 GRIK2Q13002 908 aa4.78□□□□□ -1.64
CCDC7-209ENST00000539197 HIST2H2ACQ16777 129 aaPredicted RBP4.78□□□□□ -1.64
CCDC7-209ENST00000539197 WDR38Q5JTN6 314 aa4.78□□□□□ -1.64
CCDC7-209ENST00000539197 GGNBP1Q5YKI7 109 aa4.78□□□□□ -1.64
CCDC7-209ENST00000539197 TTI2Q6NXR4 508 aa4.78□□□□□ -1.64
CCDC7-209ENST00000539197 DUS1LQ6P1R4 473 aaKnown RBP4.78□□□□□ -1.64
CCDC7-209ENST00000539197 CTAGE4Q8IX94 777 aa4.78□□□□□ -1.64
CCDC7-209ENST00000539197 C11orf65Q8NCR3 313 aa4.78□□□□□ -1.64
CCDC7-209ENST00000539197 NOC3LQ8WTT2 800 aaKnown RBP4.78□□□□□ -1.64
CCDC7-209ENST00000539197 EGFL8Q99944 293 aa4.78□□□□□ -1.64
CCDC7-209ENST00000539197 NEURL2Q9BR09 285 aa4.78□□□□□ -1.64
CCDC7-209ENST00000539197 GLIS2Q9BZE0 524 aaPredicted RBP4.78□□□□□ -1.64
CCDC7-209ENST00000539197 TFB2MQ9H5Q4 396 aaKnown RBP4.78□□□□□ -1.64
CCDC7-209ENST00000539197 HINT3Q9NQE9 182 aaKnown RBP4.78□□□□□ -1.64
CCDC7-209ENST00000539197 BEX4Q9NWD9 120 aaPredicted RBP4.78□□□□□ -1.64
CCDC7-209ENST00000539197 HSPB7Q9UBY9 170 aa4.78□□□□□ -1.64
CCDC7-209ENST00000539197 IGLV1-44P01699 117 aa4.77□□□□□ -1.65
CCDC7-209ENST00000539197 IRX1P78414 480 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-209ENST00000539197 RPL24P83731 157 aaKnown RBP4.77□□□□□ -1.65
CCDC7-209ENST00000539197 SORDQ00796 357 aa4.77□□□□□ -1.65
CCDC7-209ENST00000539197 PPP2R5BQ15173 497 aa4.77□□□□□ -1.65
CCDC7-209ENST00000539197 TMEM35AQ53FP2 167 aa4.77□□□□□ -1.65
CCDC7-209ENST00000539197 PCDH20Q8N6Y1 951 aaKnown RBP4.77□□□□□ -1.65
CCDC7-209ENST00000539197 OR52I2Q8NH67 350 aa4.77□□□□□ -1.65
CCDC7-209ENST00000539197 GRAMD2BQ96HH9 432 aa4.77□□□□□ -1.65
CCDC7-209ENST00000539197 NEUROD6Q96NK8 337 aa4.77□□□□□ -1.65
CCDC7-209ENST00000539197 SLC52A3Q9NQ40 469 aa4.77□□□□□ -1.65
CCDC7-209ENST00000539197 C20orf141Q9NUB4 165 aa4.77□□□□□ -1.65
CCDC7-209ENST00000539197 PADI3Q9ULW8 664 aa4.77□□□□□ -1.65
CCDC7-209ENST00000539197 RNF215Q9Y6U7 377 aa4.77□□□□□ -1.65
CCDC7-209ENST00000539197 NR5A2O00482 541 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 ZNHIT1O43257 154 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 SYNGR3O43761 229 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 PRKNO60260 465 aaPredicted RBP4.76□□□□□ -1.65
CCDC7-209ENST00000539197 FTCDO95954 541 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 CD48P09326 243 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 GPD2P43304 727 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 PAPOLAP51003 745 aaKnown RBP4.76□□□□□ -1.65
CCDC7-209ENST00000539197 SLC12A1Q13621 1099 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 ANO1Q5XXA6 986 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 OR7E24Q6IFN5 339 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 HAPLN4Q86UW8 402 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 APLFQ8IW19 511 aaPredicted RBP4.76□□□□□ -1.65
CCDC7-209ENST00000539197 ACVR1CQ8NER5 493 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 TRIM58Q8NG06 486 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 OR5R1Q8NH85 324 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 FCAMRQ8WWV6 532 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 TMEM190Q8WZ59 177 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 QRFPRQ96P65 431 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 ATOH8Q96SQ7 321 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 ACSL5Q9ULC5 683 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 KIAA1210Q9ULL0 1709 aa4.76□□□□□ -1.65
CCDC7-209ENST00000539197 CACNA1FO60840 1977 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 hCG_1642624A0A1W2PR95 340 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 TEX22C9J3V5 150 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 CIDEAO60543 219 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 TFP02787 698 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 PRSS56P0CW18 603 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 LMO4P61968 165 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 RNPS1Q15287 305 aaKnown RBP4.75□□□□□ -1.65
CCDC7-209ENST00000539197 PDCD2Q16342 344 aaPredicted RBP4.75□□□□□ -1.65
CCDC7-209ENST00000539197 WDR45BQ5MNZ6 344 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms