RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 SERPINC1P01008 464 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 PDHA1P08559 390 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 CD48P09326 243 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 PBX1P40424 430 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 POLD2P49005 469 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 MAPK10P53779 464 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 OR1D5P58170 312 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 CTBSQ01459 385 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 MMRN1Q13201 1228 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 KRT81Q14533 505 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 CLPPQ16740 277 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-206ENST00000538970 AMZ1Q400G9 498 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 LRRC66Q68CR7 880 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 ALG1LQ6GMV1 187 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 CAVIN1Q6NZI2 390 aaKnown RBP12.47□□□□□ -0.41
VAMP1-206ENST00000538970 DOK6Q6PKX4 331 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 SLC30A9Q6PML9 568 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 RFLNAQ6ZTI6 216 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 PIM3Q86V86 326 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 ZFAND4Q86XD8 727 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 LRRC49Q8IUZ0 686 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 NAGSQ8N159 534 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 PATE1Q8WXA2 126 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 SYN2Q92777 582 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-206ENST00000538970 USP7Q93009 1102 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 SGF29Q96ES7 293 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 SCARF2Q96GP6 870 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-206ENST00000538970 SMIM14Q96QK8 99 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 SEMA3CQ99985 751 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 FUCA2Q9BTY2 467 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 NUP85Q9BW27 656 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 POLR1EQ9GZS1 481 aaKnown RBP12.47□□□□□ -0.41
VAMP1-206ENST00000538970 CDH19Q9H159 772 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 CD84Q9UIB8 345 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 BZW2Q9Y6E2 419 aaKnown RBP12.47□□□□□ -0.41
VAMP1-206ENST00000538970 TEX15Q9BXT5 2789 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 A0A0J9YYE9 177 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.46□□□□□ -0.41
VAMP1-206ENST00000538970 HGSO14964 777 aaPredicted RBP12.46□□□□□ -0.41
VAMP1-206ENST00000538970 TRBC1P01850 177 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 SERPING1P05155 500 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 CYP1A2P05177 515 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 CD1CP29017 333 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 ALDH4A1P30038 563 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 ADCY8P40145 1251 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 GARSP41250 739 aaKnown RBP12.46□□□□□ -0.41
VAMP1-206ENST00000538970 GPR1P46091 355 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 ARSEP51690 589 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 GALNT2Q10471 571 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 PEX6Q13608 980 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 IHHQ14623 411 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 NCBP2-AS2Q69YL0 99 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 ADAMTSL4Q6UY14 1074 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 ZNF574Q6ZN55 896 aaPredicted RBP12.46□□□□□ -0.41
VAMP1-206ENST00000538970 USP53Q70EK8 1073 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 ZNF765Q7L2R6 523 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 VASH2Q86V25 355 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 DTX1Q86Y01 620 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 NDUFAF2Q8N183 169 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 MAML1Q92585 1016 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 SCAMP4Q969E2 229 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 AP2M1Q96CW1 435 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 CCDC74BQ96LY2 380 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 OR2M4Q96R27 311 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 TDRD1Q9BXT4 1180 aaKnown RBP12.46□□□□□ -0.41
VAMP1-206ENST00000538970 B3GNT4Q9C0J1 378 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 ABCG8Q9H221 673 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 SEPT10Q9P0V9 454 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 IL17BQ9UHF5 180 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 PLEKHM1Q9Y4G2 1056 aa12.46□□□□□ -0.41
VAMP1-206ENST00000538970 A0A087X0T9 212 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 IGHV5-10-1A0A0J9YXX1 117 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 PPM1DO15297 605 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 ZW10O43264 779 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 FAM228BP0C875 321 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 CCL4P13236 92 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 ZNF30P17039 623 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 CD82P27701 267 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 CSF2RBP32927 897 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 ACTR1BP42025 376 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 GPR3P46089 330 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 STC1P52823 247 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 ACTR1AP61163 376 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 DSC2Q02487 901 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 PTSQ03393 145 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 ITKQ08881 620 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 BIRC2Q13490 618 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 DPYSL3Q14195 570 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 PAFAH1B3Q15102 231 aaKnown RBP12.45□□□□□ -0.42
VAMP1-206ENST00000538970 LINC00303Q3SY05 128 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 MANEAQ5SRI9 462 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 TRIM74Q86UV6 250 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 EXD3Q8N9H8 876 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 RCBTB1Q8NDN9 531 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 AGAP2Q99490 1192 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 AKAP7Q9P0M2 348 aaPredicted RBP12.45□□□□□ -0.42
VAMP1-206ENST00000538970 TMEM98Q9Y2Y6 226 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 PCDHGA4Q9Y5G9 962 aa12.45□□□□□ -0.42
VAMP1-206ENST00000538970 AHCTF1Q8WYP5 2266 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 IGHV1OR21-1A0A087WYE8 117 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms