RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 GPR21Q99679 349 aa14.1□□□□□ -0.15
ACTN1-205ENST00000538545 NCF1BA6NI72 391 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-205ENST00000538545 NCF1CA8MVU1 366 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-205ENST00000538545 MEI4A8MW99 385 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 SRP72O76094 671 aaKnown RBP14.09□□□□□ -0.15
ACTN1-205ENST00000538545 RHOBTB1O94844 696 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 CYBBP04839 570 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 NCF1P14598 390 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-205ENST00000538545 GRK2P25098 689 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 HNF1BP35680 557 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 GEN1Q17RS7 908 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 DPY19L3Q6ZPD9 716 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 TRIM67Q6ZTA4 783 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 ISCA2Q86U28 154 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 SFTPA1Q8IWL2 248 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 GPR65Q8IYL9 337 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 CNPY4Q8N129 248 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 CLDN19Q8N6F1 224 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 GDPD5Q8WTR4 605 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 IRF7Q92985 503 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 LMLNQ96KR4 655 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 IGFLR1Q9H665 355 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 PIDD1Q9HB75 910 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 ARHGEF3Q9NR81 526 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 MRPS23Q9Y3D9 190 aaKnown RBP14.09□□□□□ -0.15
ACTN1-205ENST00000538545 NPIPB15A6NHN6 443 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-205ENST00000538545 A8MT66 165 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 NDUFS3O75489 264 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 UGT2B4P06133 528 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 NCF2P19878 526 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-205ENST00000538545 NRIP1P48552 1158 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 NSUN2Q08J23 767 aaKnown RBP eCLIP14.09□□□□□ -0.15
ACTN1-205ENST00000538545 GPM6BQ13491 265 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 OR4D1Q15615 310 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 FAM83EQ2M2I3 478 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 TMEM198Q66K66 360 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 ZNF783Q6ZMS7 281 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 C12orf40Q86WS4 652 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 ADGRG2Q8IZP9 1017 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 SIDT2Q8NBJ9 832 aaKnown RBP14.09□□□□□ -0.15
ACTN1-205ENST00000538545 RAB3IL1Q8TBN0 382 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 LPGAT1Q92604 370 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 ASIC4Q96FT7 647 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 BIRC8Q96P09 236 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 TBC1D10AQ9BXI6 508 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 IL17CQ9P0M4 197 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-205ENST00000538545 MAFFQ9ULX9 164 aa14.09□□□□□ -0.15
ACTN1-205ENST00000538545 ARIH1Q9Y4X5 557 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-205ENST00000538545 C2orf16Q68DN1 1984 aa14.08□□□□□ -0.15
ACTN1-205ENST00000538545 VCANP13611 3396 aa14.08□□□□□ -0.15
ACTN1-205ENST00000538545 OTOL1A6NHN0 477 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-205ENST00000538545 UBXN8O00124 270 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 SKAP2O75563 359 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-205ENST00000538545 FDXRP22570 491 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 PRSS36Q5K4E3 855 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 PHTF2Q8N3S3 785 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 ACDQ96AP0 544 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 AARSD1Q9BTE6 412 aaKnown RBP14.08□□□□□ -0.16
ACTN1-205ENST00000538545 WWP1Q9H0M0 922 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 SPHK2Q9NRA0 654 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 KLC4Q9NSK0 619 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 NCKIPSDQ9NZQ3 722 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 BAIAP2L1Q9UHR4 511 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 LZTS1Q9Y250 596 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 EPOPA6NHQ4 379 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 ZNF37AP17032 561 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-205ENST00000538545 HNRNPH1P31943 449 aaKnown RBP14.08□□□□□ -0.16
ACTN1-205ENST00000538545 CCNHP51946 323 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-205ENST00000538545 EPHA5P54756 1037 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 XIAPP98170 497 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 PDAP1Q13442 181 aaKnown RBP14.08□□□□□ -0.16
ACTN1-205ENST00000538545 ZNF77Q15935 545 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 TTC31Q49AM3 519 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-205ENST00000538545 SDCCAG8Q86SQ7 713 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-205ENST00000538545 OR2AP1Q8NGE2 309 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 GIMAP7Q8NHV1 300 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 MRPL57Q9BQC6 102 aaKnown RBP14.08□□□□□ -0.16
ACTN1-205ENST00000538545 CDH19Q9H159 772 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 RETREG1Q9H6L5 497 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 CD84Q9UIB8 345 aa14.08□□□□□ -0.16
ACTN1-205ENST00000538545 A0A087X1B8 175 aa14.07□□□□□ -0.16
ACTN1-205ENST00000538545 LOC100653049A0A140TA62 436 aa14.07□□□□□ -0.16
ACTN1-205ENST00000538545 CDC7O00311 574 aa14.07□□□□□ -0.16
ACTN1-205ENST00000538545 KRT34O76011 436 aa14.07□□□□□ -0.16
ACTN1-205ENST00000538545 PABPC1P11940 636 aaKnown RBP14.07□□□□□ -0.16
ACTN1-205ENST00000538545 CTSL3PQ5NE16 218 aa14.07□□□□□ -0.16
ACTN1-205ENST00000538545 AGAP9Q5VTM2 703 aa14.07□□□□□ -0.16
ACTN1-205ENST00000538545 AFTPHQ6ULP2 937 aa14.07□□□□□ -0.16
ACTN1-205ENST00000538545 ADIPOR2Q86V24 386 aa14.07□□□□□ -0.16
ACTN1-205ENST00000538545 SNX31Q8N9S9 440 aa14.07□□□□□ -0.16
ACTN1-205ENST00000538545 VN1R2Q8NFZ6 395 aa14.07□□□□□ -0.16
ACTN1-205ENST00000538545 SMG7Q92540 1137 aaKnown RBP14.07□□□□□ -0.16
ACTN1-205ENST00000538545 PTCD3Q96EY7 689 aaKnown RBP14.07□□□□□ -0.16
ACTN1-205ENST00000538545 NSUN5Q96P11 429 aaKnown RBP14.07□□□□□ -0.16
ACTN1-205ENST00000538545 TXLNGQ9NUQ3 528 aa14.07□□□□□ -0.16
ACTN1-205ENST00000538545 UTP6Q9NYH9 597 aaKnown RBP14.07□□□□□ -0.16
ACTN1-205ENST00000538545 GTSE1Q9NYZ3 720 aa14.07□□□□□ -0.16
ACTN1-205ENST00000538545 A0A1B0GTL3 188 aa14.07□□□□□ -0.16
ACTN1-205ENST00000538545 TTC34A8MYJ7 566 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms