RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 LAPTM4BQ86VI4 370 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 GLB1L3Q8NCI6 653 aaPredicted RBP6.91□□□□□ -1.3
SORT1-209ENST00000538502 NKD2Q969F2 451 aaPredicted RBP6.91□□□□□ -1.3
SORT1-209ENST00000538502 CREB3L1Q96BA8 519 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 KCTD15Q96SI1 283 aaPredicted RBP6.91□□□□□ -1.3
SORT1-209ENST00000538502 ACAT2Q9BWD1 397 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 MTIF3Q9H2K0 278 aaKnown RBP6.91□□□□□ -1.3
SORT1-209ENST00000538502 SLC35C2Q9NQQ7 365 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 SEMA3GQ9NS98 782 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 LRRC42Q9Y546 428 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 PCDHGB3Q9Y5G1 929 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 FAM172BPA6NC97 362 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 CCNDBP1O95273 360 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 SLC6A4P31645 630 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 MAGEA2P43356 314 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 PLK1P53350 603 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 TAS2R41P59536 307 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 ORC1Q13415 861 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 NOMO1Q15155 1222 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 SLC27A1Q6PCB7 646 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 DEF8Q6ZN54 512 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 GK5Q6ZS86 529 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 PTF1AQ7RTS3 328 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 GPRC5AQ8NFJ5 357 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 IL1RAPQ9NPH3 570 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 NUDT4Q9NZJ9 180 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 REXO2Q9Y3B8 237 aaKnown RBP6.91□□□□□ -1.3
SORT1-209ENST00000538502 FABP12A6NFH5 140 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 OR5F1O95221 314 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 SERPINA4P29622 427 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 IDH3AP50213 366 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 NOMO3P69849 1222 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 PGM5Q15124 567 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 VWA5B1Q5TIE3 1220 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 EIF5AL1Q6IS14 154 aaKnown RBP6.91□□□□□ -1.3
SORT1-209ENST00000538502 TRMT11Q7Z4G4 463 aaKnown RBP6.91□□□□□ -1.3
SORT1-209ENST00000538502 DNAAF5Q86Y56 855 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 CBR4Q8N4T8 237 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 ENDOVQ8N8Q3 282 aaKnown RBP6.91□□□□□ -1.3
SORT1-209ENST00000538502 PHC3Q8NDX5 983 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 C10orf82Q8WW14 230 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 C1QTNF7Q9BXJ2 289 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 ATP13A1Q9HD20 1204 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 KCNMB3Q9NPA1 279 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 EIF2B3Q9NR50 452 aaKnown RBP6.91□□□□□ -1.3
SORT1-209ENST00000538502 TNFRSF11BO00300 401 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 FAM86B2P0C5J1 330 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 UROSP10746 265 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 FECHP22830 423 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 SEPHS1P49903 392 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 MAB21L1Q13394 359 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 INTS6LQ5JSJ4 861 aaKnown RBP6.91□□□□□ -1.3
SORT1-209ENST00000538502 GCNT6Q5T4J0 391 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 AADACL2Q6P093 401 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 CCDC28AQ8IWP9 274 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 CSGALNACT1Q8TDX6 532 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 CELF6Q96J87 481 aaKnown RBP6.91□□□□□ -1.3
SORT1-209ENST00000538502 BIRC8Q96P09 236 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 TKTL2Q9H0I9 626 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 C14orf105Q9NVL8 296 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 RAB23Q9ULC3 237 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 PCDHGA4Q9Y5G9 962 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 CNTNAP2Q9UHC6 1331 aa6.91□□□□□ -1.3
SORT1-209ENST00000538502 KANTRA0A1W2PQU2 76 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 E5RJQ4 531 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 AGPSO00116 658 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 MAGEB3O15480 346 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 CAPN15O75808 1086 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 HLA-DQA2P01906 255 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 ENO2P09104 434 aaPredicted RBP6.9□□□□□ -1.3
SORT1-209ENST00000538502 LINC00032P0C843 101 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 CXCL8P10145 99 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 CDH1P12830 882 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 RFX3P48380 749 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 ZBTB6Q15916 424 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 CYP1B1Q16678 543 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 CTXN3Q4LDR2 81 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 GPAT3Q53EU6 434 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 AGBL3Q8NEM8 1001 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 WDR48Q8TAF3 677 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 OR2B2Q9GZK3 357 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 CAPN10Q9HC96 672 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 NECTIN3Q9NQS3 549 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 TAS2R14Q9NYV8 317 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 NUP50Q9UKX7 468 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 RBMX2Q9Y388 322 aaKnown RBP6.9□□□□□ -1.3
SORT1-209ENST00000538502 CNTNAP4Q9C0A0 1308 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.9□□□□□ -1.3
SORT1-209ENST00000538502 ITGA10O75578 1167 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 LYPLA1O75608 230 aaPredicted RBP6.9□□□□□ -1.3
SORT1-209ENST00000538502 RLN1P04808 185 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 ESRP1Q6NXG1 681 aaKnown RBP6.9□□□□□ -1.3
SORT1-209ENST00000538502 LLGL2Q6P1M3 1020 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 FAM183BPQ6ZVS7 135 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 DSG4Q86SJ6 1040 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 TMEM17Q86X19 198 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 ASB9Q96DX5 294 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 SNRNP25Q9BV90 132 aaKnown RBP6.9□□□□□ -1.3
SORT1-209ENST00000538502 SEC14L4Q9UDX3 406 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 DPP7Q9UHL4 492 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms