RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 ALOX12P18054 663 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 M6PRP20645 277 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 SAT1P21673 171 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 PROZP22891 400 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 HOXC13P31276 330 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 SREBF1P36956 1147 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 SERPINB9P50453 376 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 IRF3Q14653 427 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 NOMO1Q15155 1222 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 PON2Q15165 354 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 PTCHD3Q3KNS1 767 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 TBRG1Q3YBR2 411 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 GPATCH4Q5T3I0 446 aaKnown RBP10.68□□□□□ -0.7
RTN3-208ENST00000537981 STXBP5Q5T5C0 1151 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 PACRGLQ8N7B6 248 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 SIMC1Q8NDZ2 872 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 OR4M2Q8NGB6 313 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 SH3KBP1Q96B97 665 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 NRBF2Q96F24 287 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 TOE1Q96GM8 510 aaKnown RBP10.68□□□□□ -0.7
RTN3-208ENST00000537981 AGAP2Q99490 1192 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 AIFM2Q9BRQ8 373 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 FAM213AQ9BRX8 229 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 ZBTB20Q9HC78 741 aaPredicted RBP10.68□□□□□ -0.7
RTN3-208ENST00000537981 FBRSL1Q9HCM7 1045 aaKnown RBP10.68□□□□□ -0.7
RTN3-208ENST00000537981 CYTH4Q9UIA0 394 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 FBXO10Q9UK96 956 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 AGO1Q9UL18 857 aaKnown RBP10.68□□□□□ -0.7
RTN3-208ENST00000537981 MRASO14807 208 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 KPNA6O60684 536 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 B3GALNT1O75752 331 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 GABARAPO95166 117 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 GOT2P00505 430 aaKnown RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 DNTTP04053 509 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 CASP2P42575 452 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 CYP24A1Q07973 514 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 TRAP1Q12931 704 aaKnown RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 ADAMTSL2Q86TH1 951 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 ABI1Q8IZP0 508 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 METTL2AQ96IZ6 378 aaKnown RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 OMDQ99983 421 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 UPF3AQ9H1J1 476 aaKnown RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 ZNF304Q9HCX3 659 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 DDX4Q9NQI0 724 aaKnown RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 ACOXLQ9NUZ1 547 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 SRP68Q9UHB9 627 aaKnown RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 RGPD3A6NKT7 1758 aaPredicted RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 RGPD4Q7Z3J3 1758 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 ATP6AP2A0A1C7CYW4 349 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 KRT87PA6NCN2 255 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 LEUTXA8MZ59 168 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 POLRMTO00411 1230 aaKnown RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 INPP4BO15327 924 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 ACSL4O60488 711 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 ATP6AP2O75787 350 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 HNRNPLP14866 589 aaKnown RBP eCLIP10.67□□□□□ -0.72e-12■■■□□ 15.2
RTN3-208ENST00000537981 YWHAQP27348 245 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 MIPP30301 263 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 C1QTNF8P60827 252 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 EMX1Q04741 257 aaPredicted RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 FASTKQ14296 549 aaKnown RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 PDK2Q15119 407 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 TAZQ16635 292 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 BOLA3Q53S33 107 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 VARS2Q5ST30 1063 aaKnown RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 INTS5Q6P9B9 1019 aaKnown RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 METTL3Q86U44 580 aaKnown RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 TMEM130Q8N3G9 435 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 CHDHQ8NE62 594 aaPredicted RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 ACMSDQ8TDX5 336 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 PPP1R13LQ8WUF5 828 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 FAR1Q8WVX9 515 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 ACAT2Q9BWD1 397 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 C6orf62Q9GZU0 229 aaPredicted RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 RNF167Q9H6Y7 350 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 SLC38A10Q9HBR0 1119 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 SPON1Q9HCB6 807 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 ZIM2Q9NZV7 527 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 ACTR3BQ9P1U1 418 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 OPTCQ9UBM4 332 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 GIMAP2Q9UG22 337 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 RAP2CQ9Y3L5 183 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 ZNF638Q14966 1978 aaKnown RBP10.67□□□□□ -0.7
RTN3-208ENST00000537981 TRIP11Q15643 1979 aa10.67□□□□□ -0.7
RTN3-208ENST00000537981 FAM25EA8MYX2 175 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 PMM2O15305 246 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 NOBOXO60393 691 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 NDUFB10O96000 172 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 HMGCRP04035 888 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 PCNAP12004 261 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 ZNF250P15622 560 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 MGAT1P26572 445 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 IL12AP29459 219 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 ORC1Q13415 861 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 NAB1Q13506 487 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 CYP51A1Q16850 503 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 DGUOKQ16854 277 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 SOWAHCQ53LP3 525 aaPredicted RBP10.66□□□□□ -0.7
RTN3-208ENST00000537981 ALFQ53S48 1182 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 ZNF677Q86XU0 584 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms