RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 TAF2Q6P1X5 1199 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 RPS27LQ71UM5 84 aaKnown RBP12.14□□□□□ -0.47
CPSF7-218ENST00000537641 SNX31Q8N9S9 440 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 ARRDC4Q8NCT1 418 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 TWIST2Q8WVJ9 160 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 CYGBQ8WWM9 190 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 HDAC10Q969S8 669 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 LRRC58Q96CX6 371 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 SMARCD1Q96GM5 515 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 C3orf30Q96M34 536 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 PPP1R10Q96QC0 940 aaKnown RBP12.14□□□□□ -0.47
CPSF7-218ENST00000537641 MFSD1Q9H3U5 465 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 ATP13A1Q9HD20 1204 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 SLC38A7Q9NVC3 462 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 RBM22Q9NW64 420 aaKnown RBP eCLIP12.14□□□□□ -0.471e-6■■■■□ 23.9
CPSF7-218ENST00000537641 FNIP2Q9P278 1114 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 SFMBT1Q9UHJ3 866 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 ZNF639Q9UID6 485 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 ANAPC2Q9UJX6 822 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 CDH9Q9ULB4 789 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 OAZ3Q9UMX2 235 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 VWA7Q9Y334 891 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 SCN10AQ9Y5Y9 1956 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 A0A1W2PPW3 197 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 MANSC4A6NHS7 340 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-218ENST00000537641 EI24O14681 340 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 PTGESO14684 152 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 PMPCBO75439 489 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 IGHA2P01877 340 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 UGT1A6P19224 532 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 CHRNA4P43681 627 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 RPS9P46781 194 aaKnown RBP12.13□□□□□ -0.47
CPSF7-218ENST00000537641 TMBIM6P55061 237 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 EEFSECP57772 596 aaKnown RBP12.13□□□□□ -0.47
CPSF7-218ENST00000537641 NAA20P61599 178 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 ADARB1P78563 741 aaKnown RBP12.13□□□□□ -0.47
CPSF7-218ENST00000537641 TNK2Q07912 1038 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 AASDHQ4L235 1098 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-218ENST00000537641 ZNF789Q5FWF6 425 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 AFMIDQ63HM1 303 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 TMEM26Q6ZUK4 368 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 KCTD8Q6ZWB6 473 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 SPATA19Q7Z5L4 167 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 ISCA2Q86U28 154 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 CILP2Q8IUL8 1156 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 DDIASQ8IXT1 998 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 OR13F1Q8NGS4 319 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 DQX1Q8TE96 717 aaKnown RBP12.13□□□□□ -0.47
CPSF7-218ENST00000537641 ANKRD49Q8WVL7 239 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 SOCS4Q8WXH5 440 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 EDEM1Q92611 657 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 RNF34Q969K3 372 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 TMEM125Q96AQ2 219 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 ITPKCQ96DU7 683 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 ZNF419Q96HQ0 510 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-218ENST00000537641 FBXL20Q96IG2 436 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 PLEKHA8Q96JA3 519 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 TDRD1Q9BXT4 1180 aaKnown RBP12.13□□□□□ -0.47
CPSF7-218ENST00000537641 SLC39A8Q9C0K1 460 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 PAIP1Q9H074 479 aaKnown RBP12.13□□□□□ -0.47
CPSF7-218ENST00000537641 MUC3BQ9H195 1237 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 ALG9Q9H6U8 611 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 POPDC3Q9HBV1 291 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 SDR39U1Q9NRG7 319 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-218ENST00000537641 EGFL7Q9UHF1 273 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 PAIP2BQ9ULR5 123 aaKnown RBP12.13□□□□□ -0.47
CPSF7-218ENST00000537641 B3GNT3Q9Y2A9 372 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 TDRKHQ9Y2W6 561 aaKnown RBP12.13□□□□□ -0.47
CPSF7-218ENST00000537641 SLC30A1Q9Y6M5 507 aa12.13□□□□□ -0.47
CPSF7-218ENST00000537641 ATP6AP2A0A1C7CYW4 349 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 FAM149AA5PLN7 773 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 TMEM221A6NGB7 291 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 M0QZ92 97 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 PIP5K1BO14986 540 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 KPNA6O60684 536 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 ATP6AP2O75787 350 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 SEC24DO94855 1032 aaPredicted RBP12.12□□□□□ -0.47
CPSF7-218ENST00000537641 LDLRP01130 860 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 RPL10P27635 214 aaKnown RBP12.12□□□□□ -0.47
CPSF7-218ENST00000537641 OXTRP30559 389 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 GSK3BP49841 420 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 SERPINH1P50454 418 aaKnown RBP12.12□□□□□ -0.47
CPSF7-218ENST00000537641 WNT3AP56704 352 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 MRPS6P82932 125 aaKnown RBP12.12□□□□□ -0.47
CPSF7-218ENST00000537641 KCNC4Q03721 635 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 EIF4EBP2Q13542 120 aaPredicted RBP12.12□□□□□ -0.47
CPSF7-218ENST00000537641 TUBA3CQ13748 450 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 CYP51A1Q16850 503 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 CYBRD1Q53TN4 286 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 OGFOD2Q6N063 350 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 FAM117BQ6P1L5 589 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 ZNF773Q6PK81 442 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 BLOC1S3Q6QNY0 202 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 DCDC5Q6ZRR9 648 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 DCP1BQ8IZD4 617 aaKnown RBP12.12□□□□□ -0.47
CPSF7-218ENST00000537641 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.12□□□□□ -0.47
CPSF7-218ENST00000537641 CHPT1Q8WUD6 406 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 TRUB1Q8WWH5 349 aaKnown RBP12.12□□□□□ -0.47
CPSF7-218ENST00000537641 FATE1Q969F0 183 aa12.12□□□□□ -0.47
CPSF7-218ENST00000537641 PCED1BQ96HM7 432 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms