RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 TIGD2Q4W5G0 525 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 SLC9B1Q4ZJI4 515 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 NHSL2Q5HYW2 709 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 CHADLQ6NUI6 762 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 CYP4V2Q6ZWL3 525 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 EBNA1BP2Q99848 306 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 PCDHAC1Q9H158 963 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ALG9Q9H6U8 611 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 NEK6Q9HC98 313 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 DYRK4Q9NR20 520 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 LATS2Q9NRM7 1088 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 SACM1LQ9NTJ5 587 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 CCM2LQ9NUG4 571 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ING3Q9NXR8 418 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 WWOXQ9NZC7 414 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 MRPL42Q9Y6G3 142 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 C9JVG2 144 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 SSNA1O43805 119 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 SYNCRIPO60506 623 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 KLHL18O94889 574 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 JCHAINP01591 159 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 AMHP03971 560 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ERP29P30040 261 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 PPP3CCP48454 512 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 NR2C2P49116 596 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 NR6A1Q15406 480 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 DLG2Q15700 870 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 SULT1C3Q6IMI6 304 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 NANOGP8Q6NSW7 305 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ADAMTSL2Q86TH1 951 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 GRAMD2AQ8IUY3 354 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 SCN4BQ8IWT1 228 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 NETO2Q8NC67 525 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ABHD11Q8NFV4 315 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 GPRASP2Q96D09 838 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 C19orf60Q96EN9 201 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 FAM163AQ96GL9 167 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 SH3YL1Q96HL8 342 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 CELF6Q96J87 481 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ALPK1Q96QP1 1244 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 KCNQ5Q9NR82 932 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ADPRHL2Q9NX46 363 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 A8MV72 311 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ANXA9O76027 345 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ALDH1A1P00352 501 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 JUNP05412 331 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 TSNQ15631 228 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 DCAF4L1Q3SXM0 396 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ATF7IP2Q5U623 682 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 C15orf52Q6ZUT6 534 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 EFHBQ8N7U6 833 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 APPL2Q8NEU8 664 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 SPPL2AQ8TCT8 520 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 MCOLN3Q8TDD5 553 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 SLC47A1Q96FL8 570 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 AURKBQ96GD4 344 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 B3GALT6Q96L58 329 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ACE2Q9BYF1 805 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 DPY30Q9C005 99 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 TRIM45Q9H8W5 580 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 PAK1IP1Q9NWT1 392 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ROBO1Q9Y6N7 1651 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 PLOD3O60568 738 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 CPNE3O75131 537 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 FOSL1P15407 271 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 MSH3P20585 1137 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 GLDCP23378 1020 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 PSMB4P28070 264 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 EIF2DP41214 584 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 C1DQ13901 141 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ZRANB3Q5FWF4 1079 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 AGAP6Q5VW22 663 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 C11orf88Q6PI97 169 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 RASSF6Q6ZTQ3 369 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ACOT1Q86TX2 421 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ZC3H7AQ8IWR0 971 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ADHFE1Q8IWW8 467 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 GALNT11Q8NCW6 608 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 FAM45AQ8TCE6 357 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 MYDGFQ969H8 173 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 AGAP4Q96P64 663 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 TAAR1Q96RJ0 339 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 KLHL1Q9NR64 748 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 TBC1D13Q9NVG8 400 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ZMAT5Q9UDW3 170 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 C3orf18Q9UK00 162 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 NOX1Q9Y5S8 564 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 A0A1W2PRG6 482 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF99A8MXY4 864 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ERBB2P04626 1255 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 HOXB8P17481 243 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 LBPP18428 481 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 CDKN2BP42772 138 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 PUDPQ08623 228 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 PAOXQ6QHF9 649 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 FGD2Q7Z6J4 655 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 OR8H3Q8N146 312 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 CACTIN-AS1Q8N1I8 211 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 RTL3Q8N8U3 475 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 HSD17B14Q9BPX1 270 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms