RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 SCG3Q8WXD2 468 aaKnown RBP12.44□□□□□ -0.42
PRKDC-207ENST00000536483 COL26A1Q96A83 441 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 CCDC74AQ96AQ1 378 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 ZNF830Q96NB3 372 aaPredicted RBP12.44□□□□□ -0.42
PRKDC-207ENST00000536483 TDRD1Q9BXT4 1180 aaKnown RBP12.44□□□□□ -0.42
PRKDC-207ENST00000536483 MAK16Q9BXY0 300 aaKnown RBP12.44□□□□□ -0.42
PRKDC-207ENST00000536483 EPB41L5Q9HCM4 733 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.44□□□□□ -0.42
PRKDC-207ENST00000536483 EFR3BQ9Y2G0 817 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 AHCTF1Q8WYP5 2266 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 RCCD1A6NED2 376 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 APOL1O14791 398 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 PLD2O14939 933 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 EFSO43281 561 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 SPOPO43791 374 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 RASGRP1O95267 797 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 PRKCGP05129 697 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 RPLP0P05388 317 aaKnown RBP12.43□□□□□ -0.42
PRKDC-207ENST00000536483 MMP2P08253 660 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 PDHA1P08559 390 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 ALPIP09923 528 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 ZNF30P17039 623 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 LHCGRP22888 699 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 HTR1BP28222 390 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 CCL7P80098 99 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 NIPAL4Q0D2K0 466 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 TFDP2Q14188 446 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 PNCKQ6P2M8 343 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 USP45Q70EL2 814 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 ZNF765Q7L2R6 523 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 RAB11FIP2Q7L804 512 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 RCOR2Q8IZ40 523 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 NDUFAF2Q8N183 169 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 EXD1Q8NHP7 514 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 TRIM44Q96DX7 344 aaPredicted RBP12.43□□□□□ -0.42
PRKDC-207ENST00000536483 DTD2Q96FN9 168 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 MED8Q96G25 268 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 LIN37Q96GY3 246 aaPredicted RBP12.43□□□□□ -0.42
PRKDC-207ENST00000536483 GFM1Q96RP9 751 aaKnown RBP12.43□□□□□ -0.42
PRKDC-207ENST00000536483 CCNL2Q96S94 520 aaPredicted RBP12.43□□□□□ -0.42
PRKDC-207ENST00000536483 FOXP3Q9BZS1 431 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 DNPEPQ9ULA0 475 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 GPR34Q9UPC5 381 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 REXO2Q9Y3B8 237 aaKnown RBP12.43□□□□□ -0.42
PRKDC-207ENST00000536483 OR1A2Q9Y585 309 aa12.43□□□□□ -0.42
PRKDC-207ENST00000536483 A0A0J9YYE9 177 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 A0A1W2PQM1 296 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 NPIPB15A6NHN6 443 aaPredicted RBP12.42□□□□□ -0.42
PRKDC-207ENST00000536483 SOWAHDA6NJG2 315 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 D6RAR5 112 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 PPP1R12AO14974 1030 aaPredicted RBP12.42□□□□□ -0.42
PRKDC-207ENST00000536483 ZRANB2O95218 330 aaKnown RBP eCLIP12.42□□□□□ -0.42
PRKDC-207ENST00000536483 JCHAINP01591 159 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 TRBC1P01850 177 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 KRT1P04264 644 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 HLA-DQB2P05538 268 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 HGFP14210 728 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 CA4P22748 312 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 SLC5A2P31639 672 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 UGT1A5P35504 534 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 NOP2P46087 812 aaKnown RBP12.42□□□□□ -0.42
PRKDC-207ENST00000536483 INHBCP55103 352 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 SRP54P61011 504 aaKnown RBP12.42□□□□□ -0.42
PRKDC-207ENST00000536483 COPS2P61201 443 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 PRKD1Q15139 912 aaPredicted RBP12.42□□□□□ -0.42
PRKDC-207ENST00000536483 TGIF1Q15583 401 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 PPP2R5EQ16537 467 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 TFDP3Q5H9I0 405 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 ZFYVE27Q5T4F4 411 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 KCTD16Q68DU8 428 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 RAD9BQ6WBX8 426 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 SPOCD1Q6ZMY3 1216 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 GKN2Q86XP6 184 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 JAMLQ86YT9 394 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 PLA2G15Q8NCC3 412 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 CCNYQ8ND76 341 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.42□□□□□ -0.42
PRKDC-207ENST00000536483 FUBP1Q96AE4 644 aaKnown RBP12.42□□□□□ -0.42
PRKDC-207ENST00000536483 RNF25Q96BH1 459 aaPredicted RBP12.42□□□□□ -0.42
PRKDC-207ENST00000536483 IMP4Q96G21 291 aaKnown RBP12.42□□□□□ -0.42
PRKDC-207ENST00000536483 PDLIM2Q96JY6 352 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 WDR92Q96MX6 357 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 TEX101Q9BY14 249 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 KLQ9UEF7 1012 aa12.42□□□□□ -0.42
PRKDC-207ENST00000536483 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.42□□□□□ -0.42
PRKDC-207ENST00000536483 hCG_1818297A0A087WSY0 165 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 KCNK1O00180 336 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 AGRPO00253 132 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 PDE2AO00408 941 aaPredicted RBP12.41□□□□□ -0.42
PRKDC-207ENST00000536483 MAP3K6O95382 1288 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 TNFP01375 233 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 PCCBP05166 539 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 KELP23276 732 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 CTNNA1P35221 906 aaKnown RBP12.41□□□□□ -0.42
PRKDC-207ENST00000536483 PTPN7P35236 360 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 VAV2P52735 878 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 DSC2Q02487 901 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 PTSQ03393 145 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 ZBTB17Q13105 803 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 SRSF6Q13247 344 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms