RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 KCTD16Q68DU8 428 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 SLC9A4Q6AI14 798 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 LRRC69Q6ZNQ3 347 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 HSD11B1LQ7Z5J1 315 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 CPNE8Q86YQ8 564 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 NRSN1Q8IZ57 195 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 PAF1Q8N7H5 531 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 SLC35G2Q8TBE7 412 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 ARRDC2Q8TBH0 407 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 GPBAR1Q8TDU6 330 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 RAPGEF5Q92565 580 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 LIN37Q96GY3 246 aaPredicted RBP10.78□□□□□ -0.68
CCDC60-202ENST00000535685 CCDC42Q96M95 316 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 CHP1Q99653 195 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 CCDC3Q9BQI4 270 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 LGR4Q9BXB1 951 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 FRMD8Q9BZ67 464 aaPredicted RBP10.78□□□□□ -0.68
CCDC60-202ENST00000535685 DEF6Q9H4E7 631 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 ASCL3Q9NQ33 180 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 RBM22Q9NW64 420 aaKnown RBP eCLIP10.78□□□□□ -0.68
CCDC60-202ENST00000535685 TRNAU1APQ9NX07 287 aaKnown RBP10.78□□□□□ -0.68
CCDC60-202ENST00000535685 DTLQ9NZJ0 730 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 RALYQ9UKM9 306 aaKnown RBP10.78□□□□□ -0.68
CCDC60-202ENST00000535685 A0A1W2PNU3 283 aaPredicted RBP10.77□□□□□ -0.69
CCDC60-202ENST00000535685 C3orf70A6NLC5 250 aaPredicted RBP10.77□□□□□ -0.69
CCDC60-202ENST00000535685 NUDT21O43809 227 aaKnown RBP10.77□□□□□ -0.69
CCDC60-202ENST00000535685 NOBOXO60393 691 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 CEACAM5P06731 702 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 IVLP07476 585 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 CA4P22748 312 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 ETV3P41162 512 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 PDX1P52945 283 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 HADHBP55084 474 aaKnown RBP10.77□□□□□ -0.69
CCDC60-202ENST00000535685 GABREP78334 506 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 IFI35P80217 286 aaPredicted RBP10.77□□□□□ -0.69
CCDC60-202ENST00000535685 CDK3Q00526 305 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 PTSQ03393 145 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 GBE1Q04446 702 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 PPIDQ08752 370 aaKnown RBP10.77□□□□□ -0.69
CCDC60-202ENST00000535685 EIF3IQ13347 325 aaKnown RBP10.77□□□□□ -0.69
CCDC60-202ENST00000535685 PEX6Q13608 980 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 SPIDRQ14159 915 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 SLC14A2Q15849 920 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 CLPPQ16740 277 aaPredicted RBP10.77□□□□□ -0.69
CCDC60-202ENST00000535685 CERCAMQ5T4B2 595 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 SARM1Q6SZW1 724 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 CRTC1Q6UUV9 634 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 ADAMTSL4Q6UY14 1074 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 Q6ZVL8 140 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 RD3Q7Z3Z2 195 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 HEATR4Q86WZ0 1026 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 CNGA4Q8IV77 575 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 CCDC13Q8IYE1 715 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 PLD5Q8N7P1 536 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 KYQ8NBH2 561 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 ZNF248Q8NDW4 579 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 PDCD6IPQ8WUM4 868 aaKnown RBP10.77□□□□□ -0.69
CCDC60-202ENST00000535685 PRR11Q96HE9 360 aaPredicted RBP10.77□□□□□ -0.69
CCDC60-202ENST00000535685 SLC46A1Q96NT5 459 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 TDRD1Q9BXT4 1180 aaKnown RBP10.77□□□□□ -0.69
CCDC60-202ENST00000535685 BRD8Q9H0E9 1235 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 PRORYQ9H606 182 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 NHEJ1Q9H9Q4 299 aaPredicted RBP10.77□□□□□ -0.69
CCDC60-202ENST00000535685 THSD1Q9NS62 852 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 SLC17A4Q9Y2C5 497 aa10.77□□□□□ -0.69
CCDC60-202ENST00000535685 CCDC187A0A096LP49 1063 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 A0A1W2PQM1 296 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 RGSL1A5PLK6 1076 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 CAPN8A6NHC0 703 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 A8MX80 341 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 CDRT15L2A8MXV6 281 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 SOD1P00441 154 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 FUCA1P04066 466 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 MPOP05164 745 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 HLA-DQB2P05538 268 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 ZFXP17010 805 aaPredicted RBP10.76□□□□□ -0.69
CCDC60-202ENST00000535685 CCKBRP32239 447 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 STC1P52823 247 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 PCBP4P57723 403 aaKnown RBP10.76□□□□□ -0.69
CCDC60-202ENST00000535685 DSC2Q02487 901 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 NIPAL4Q0D2K0 466 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 HLTFQ14527 1009 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCDC60-202ENST00000535685 MESDQ14696 234 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 NR1D2Q14995 579 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 TAZQ16635 292 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 C14orf28Q4W4Y0 310 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 LRRC66Q68CR7 880 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 ZNF438Q7Z4V0 828 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 TAF8Q7Z7C8 310 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 CLEC14AQ86T13 490 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 TSPAN33Q86UF1 283 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 NRROSQ86YC3 692 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 LSM14AQ8ND56 463 aaKnown RBP10.76□□□□□ -0.69
CCDC60-202ENST00000535685 FAM46DQ8NEK8 389 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 WDR36Q8NI36 951 aaKnown RBP10.76□□□□□ -0.69
CCDC60-202ENST00000535685 KIAA1524Q8TCG1 905 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 CCDC74AQ96AQ1 378 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 ATXN7L3BQ96GX2 97 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 ZNF830Q96NB3 372 aaPredicted RBP10.76□□□□□ -0.69
CCDC60-202ENST00000535685 OLFM3Q96PB7 478 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms