RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TEX47Q8TBZ9 253 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 ITGA1P56199 1179 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 ELF3P78545 371 aaPredicted RBP12.61□□□□□ -0.39
SPG11-203ENST00000535302 FAM131AQ6UXB0 335 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 RCN3Q96D15 328 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 WRAP53Q9BUR4 548 aaKnown RBP12.61□□□□□ -0.39
SPG11-203ENST00000535302 MORF4L1Q9UBU8 362 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 ENPP3O14638 875 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 MMP3P08254 477 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 CXCR3P49682 368 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 CDK7P50613 346 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 MANFP55145 182 aaKnown RBP12.61□□□□□ -0.39
SPG11-203ENST00000535302 SLC20A2Q08357 652 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 BST1Q10588 318 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 MAPKAPK3Q16644 382 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 PRELID2Q8N945 189 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 SETD9Q8NE22 299 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 BSNDQ8WZ55 320 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 SLC38A2Q96QD8 506 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 GFM1Q96RP9 751 aaKnown RBP12.61□□□□□ -0.39
SPG11-203ENST00000535302 CLCC1Q96S66 551 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 PCDHB18PQ96TA0 734 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 AARSD1Q9BTE6 412 aaKnown RBP12.61□□□□□ -0.39
SPG11-203ENST00000535302 TTLL2Q9BWV7 592 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 SLCO1B3Q9NPD5 702 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 MARK1Q9P0L2 795 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 NDRG2Q9UN36 371 aaKnown RBP12.61□□□□□ -0.39
SPG11-203ENST00000535302 VPS4AQ9UN37 437 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 SAMHD1Q9Y3Z3 626 aaKnown RBP12.61□□□□□ -0.39
SPG11-203ENST00000535302 MAGEB3O15480 346 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 PPP1R11O60927 126 aaPredicted RBP12.61□□□□□ -0.39
SPG11-203ENST00000535302 ULK1O75385 1050 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 KRT36O76013 467 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 CSH1P0DML2 217 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 CSH2P0DML3 217 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 IGFALSP35858 605 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 MXD1Q05195 221 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 PRKG2Q13237 762 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 ZNF846Q147U1 533 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 GPRIN3Q6ZVF9 776 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 NKAPQ8N5F7 415 aaKnown RBP12.61□□□□□ -0.39
SPG11-203ENST00000535302 PIH1D2Q8WWB5 315 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 PANX1Q96RD7 426 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 HIPK3Q9H422 1215 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 MTF2Q9Y483 593 aaPredicted RBP12.61□□□□□ -0.39
SPG11-203ENST00000535302 SNRPB2P08579 225 aaKnown RBP12.61□□□□□ -0.39
SPG11-203ENST00000535302 ARL3P36405 182 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 UGT2B15P54855 530 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 MBTD1Q05BQ5 628 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 TAF10Q12962 218 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 ADRM1Q16186 407 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 DCLRE1AQ6PJP8 1040 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 DUSP16Q9BY84 665 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 SIRPGQ9P1W8 387 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 STOML2Q9UJZ1 356 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 ADAM28Q9UKQ2 775 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 VWDEQ8N2E2 1590 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 A0A088AWK7 358 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 ADH1AP07327 375 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 ZNF10P21506 573 aaPredicted RBP12.61□□□□□ -0.39
SPG11-203ENST00000535302 TTPAP49638 278 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 KCNJ2P63252 427 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 ARSHQ5FYA8 562 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 TMPRSS11BQ86T26 416 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 HJURPQ8NCD3 748 aaPredicted RBP12.61□□□□□ -0.39
SPG11-203ENST00000535302 CD99L2Q8TCZ2 262 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 NELL1Q92832 810 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 MKL1Q969V6 931 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 ERVK-5Q9HDB9 667 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 C8orf4Q9NR00 106 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 EVLQ9UI08 416 aaPredicted RBP12.61□□□□□ -0.39
SPG11-203ENST00000535302 PREX1Q8TCU6 1659 aa12.61□□□□□ -0.39
SPG11-203ENST00000535302 NRLP54845 237 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 CDC42P60953 191 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 SLC30A6Q6NXT4 461 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 ARHGAP22Q7Z5H3 698 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 RAVER1Q8IY67 606 aaKnown RBP12.6□□□□□ -0.39
SPG11-203ENST00000535302 B3GALT6Q96L58 329 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 C5orf34Q96MH7 638 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 KCNK4Q9NYG8 393 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 TNPO3Q9Y5L0 923 aaKnown RBP12.6□□□□□ -0.39
SPG11-203ENST00000535302 C9IYK1 514 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 STX11O75558 287 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 S100GP29377 79 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 ATXN1P54253 815 aaKnown RBP12.6□□□□□ -0.39
SPG11-203ENST00000535302 GJA9P57773 515 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 RGS1Q08116 209 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 SMCO1Q147U7 214 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 RIC1Q4ADV7 1423 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 OR5T3Q8NGG3 340 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 KCTD15Q96SI1 283 aaPredicted RBP12.6□□□□□ -0.39
SPG11-203ENST00000535302 FAM192AQ9GZU8 254 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 DKK3Q9UBP4 350 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 SEPHS1P49903 392 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 SPIRE1Q08AE8 756 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 SQLEQ14534 574 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 ZNF549Q6P9A3 640 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 OLFML1Q6UWY5 402 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 GK5Q6ZS86 529 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 C12orf50Q8NA57 414 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms