RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 APOOQ9BUR5 198 aa13.08□□□□□ -0.32
TMEM258-202ENST00000535042 LGR4Q9BXB1 951 aa13.08□□□□□ -0.32
TMEM258-202ENST00000535042 IL21RQ9HBE5 538 aa13.08□□□□□ -0.32
TMEM258-202ENST00000535042 KCTD5Q9NXV2 234 aa13.08□□□□□ -0.32
TMEM258-202ENST00000535042 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.08□□□□□ -0.321e-9■■□□□ 12.7
TMEM258-202ENST00000535042 PNMA8BQ9ULN7 279 aaPredicted RBP13.08□□□□□ -0.32
TMEM258-202ENST00000535042 ZFHX2Q9C0A1 2572 aaPredicted RBP13.08□□□□□ -0.32
TMEM258-202ENST00000535042 FADS2P1A8MWK0 482 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 GAPDHSO14556 408 aaPredicted RBP13.07□□□□□ -0.32
TMEM258-202ENST00000535042 CDX4O14627 284 aaPredicted RBP13.07□□□□□ -0.32
TMEM258-202ENST00000535042 DNALI1O14645 258 aaPredicted RBP13.07□□□□□ -0.32
TMEM258-202ENST00000535042 ZNF500O60304 480 aaPredicted RBP13.07□□□□□ -0.32
TMEM258-202ENST00000535042 AVILO75366 819 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 TSHRP16473 764 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 LPOP22079 712 aaPredicted RBP13.07□□□□□ -0.32
TMEM258-202ENST00000535042 CA5AP35218 305 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 GPR1P46091 355 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 ZNF140P52738 457 aaPredicted RBP13.07□□□□□ -0.32
TMEM258-202ENST00000535042 SESN2P58004 480 aaPredicted RBP13.07□□□□□ -0.32
TMEM258-202ENST00000535042 DCDC1P59894 354 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 YPEL5P62699 121 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 CDK16Q00536 496 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 TUBB2AQ13885 445 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 PDE1CQ14123 709 aaPredicted RBP13.07□□□□□ -0.32
TMEM258-202ENST00000535042 FZD2Q14332 565 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 SHBQ15464 509 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 HLA-BQ31612 363 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 CCDC38Q502W7 563 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 KCTD16Q68DU8 428 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 RAET1GQ6H3X3 334 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 LRRC8BQ6P9F7 803 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 CAND1Q86VP6 1230 aaKnown RBP13.07□□□□□ -0.32
TMEM258-202ENST00000535042 HEATR4Q86WZ0 1026 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 OR4K2Q8NGD2 314 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 OR13C4Q8NGS5 318 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 FAM174AQ8TBP5 190 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 TUBB2BQ9BVA1 445 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 GTPBP2Q9BX10 602 aaKnown RBP13.07□□□□□ -0.32
TMEM258-202ENST00000535042 TEX101Q9BY14 249 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 TRIM31Q9BZY9 425 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 IL26Q9NPH9 171 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 NFKBIL1Q9UBC1 381 aaPredicted RBP13.07□□□□□ -0.32
TMEM258-202ENST00000535042 CNOT6Q9ULM6 557 aaKnown RBP13.07□□□□□ -0.32
TMEM258-202ENST00000535042 PCDH15Q96QU1 1955 aa13.07□□□□□ -0.32
TMEM258-202ENST00000535042 USP34Q70CQ2 3546 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 SPTY2D1-AS1A0A0U1RR47 76 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 CCDC78A2IDD5 438 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 FAM187AA6NFU0 413 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 MROH6A6NGR9 719 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 C2orf81A6NN90 581 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 ESPNB1AK53 854 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 GOLGA8MH3BSY2 632 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 CCL22O00626 93 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 TOR1BO14657 336 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 TP73O15350 636 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 STX7O15400 261 aaKnown RBP13.06□□□□□ -0.32
TMEM258-202ENST00000535042 CRTAMO95727 393 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 SYPP08247 313 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 TEAD1P28347 426 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 CRADDP78560 199 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 TMPRSS15P98073 1019 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 CDK3Q00526 305 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 EIF2B5Q13144 721 aaKnown RBP13.06□□□□□ -0.32
TMEM258-202ENST00000535042 SEPT6Q14141 434 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 NFATC4Q14934 902 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 ZNF423Q2M1K9 1284 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 ZNF542PQ5EBM4 170 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 IZUMO3Q5VZ72 239 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 ADAMTSL4Q6UY14 1074 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 TRIM74Q86UV6 250 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 PPIL6Q8IXY8 311 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 KIAA2013Q8IYS2 634 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 MINDY1Q8N5J2 469 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 MCUQ8NE86 351 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 SKA1Q96BD8 255 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 DNAJC1Q96KC8 554 aaKnown RBP13.06□□□□□ -0.32
TMEM258-202ENST00000535042 ZNF778Q96MU6 729 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 EDEM2Q9BV94 578 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 ZDHHC5Q9C0B5 715 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 GAREM1Q9H706 876 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 WDR26Q9H7D7 661 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 GDF3Q9NR23 364 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 KLF15Q9UIH9 416 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 FKBPLQ9UIM3 349 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 TMPRSS11EQ9UL52 423 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 FNDC3AQ9Y2H6 1198 aaKnown RBP13.06□□□□□ -0.32
TMEM258-202ENST00000535042 SNX24Q9Y343 169 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 PKP3Q9Y446 797 aa13.06□□□□□ -0.32
TMEM258-202ENST00000535042 DMDP11532 3685 aa13.05□□□□□ -0.32
TMEM258-202ENST00000535042 MYO15AQ9UKN7 3530 aa13.05□□□□□ -0.32
TMEM258-202ENST00000535042 TMEM202A6NGA9 273 aa13.05□□□□□ -0.32
TMEM258-202ENST00000535042 EFCAB8A8MWE9 144 aa13.05□□□□□ -0.32
TMEM258-202ENST00000535042 INPP4BO15327 924 aa13.05□□□□□ -0.32
TMEM258-202ENST00000535042 GPR39O43194 453 aa13.05□□□□□ -0.32
TMEM258-202ENST00000535042 UGT1A9O60656 530 aa13.05□□□□□ -0.32
TMEM258-202ENST00000535042 MAGEC1O60732 1142 aa13.05□□□□□ -0.32
TMEM258-202ENST00000535042 HOXC4P09017 264 aaPredicted RBP13.05□□□□□ -0.32
TMEM258-202ENST00000535042 UGT1A6P19224 532 aa13.05□□□□□ -0.32
TMEM258-202ENST00000535042 UGT1A1P22309 533 aa13.05□□□□□ -0.32
TMEM258-202ENST00000535042 UGT1A4P22310 534 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms