RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 SLC12A1Q13621 1099 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 HNF4GQ14541 408 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 ASIC2Q16515 512 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 KRT24Q2M2I5 525 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 NAA35Q5VZE5 725 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 NAPEPLDQ6IQ20 393 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 MON1BQ7L1V2 547 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 MTERF4Q7Z6M4 381 aaKnown RBP3.61□□□□□ -1.83
USP48-215ENST00000534705 DENND6AQ8IWF6 608 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 TTC5Q8N0Z6 440 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 CCDC89Q8N998 374 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 C1orf131Q8NDD1 294 aaKnown RBP3.61□□□□□ -1.83
USP48-215ENST00000534705 RFWD2Q8NHY2 731 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 TBC1D22AQ8WUA7 517 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 TMEM255BQ8WV15 326 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 DNASE2BQ8WZ79 361 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 SKA1Q96BD8 255 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 OTULINQ96BN8 352 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 RNF183Q96D59 192 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 ZNF830Q96NB3 372 aaPredicted RBP3.61□□□□□ -1.83
USP48-215ENST00000534705 CLSTN3Q9BQT9 956 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 MSTO1Q9BUK6 570 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 LMAN2LQ9H0V9 348 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 EPHX3Q9H6B9 360 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 MVB12BQ9H7P6 319 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 SPATS2LQ9NUQ6 558 aaKnown RBP3.61□□□□□ -1.83
USP48-215ENST00000534705 NRBP1Q9UHY1 535 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 MAPK8IP3Q9UPT6 1336 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 ADCY9O60503 1353 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 ADAMTSL1Q8N6G6 1762 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 SNED1Q8TER0 1413 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 ATP10DQ9P241 1426 aa3.61□□□□□ -1.83
USP48-215ENST00000534705 CKMT1AP12532 417 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 RFC4P35249 363 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 PCYT1AP49585 367 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 PMS2P54278 862 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 HILS1P60008 231 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 SEC61A1P61619 476 aaKnown RBP3.6□□□□□ -1.83
USP48-215ENST00000534705 VAMP2P63027 116 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 CHRNDQ07001 517 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 PDE1CQ14123 709 aaPredicted RBP3.6□□□□□ -1.83
USP48-215ENST00000534705 WDR43Q15061 677 aaKnown RBP eCLIP3.6□□□□□ -1.83
USP48-215ENST00000534705 WDR45BQ5MNZ6 344 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 HYIQ5T013 277 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 TAF3Q5VWG9 929 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 C17orf99Q6UX52 265 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 IL20RBQ6UXL0 311 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 PRSS45Q7RTY3 260 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.6□□□□□ -1.83
USP48-215ENST00000534705 RBM23Q86U06 439 aaKnown RBP3.6□□□□□ -1.83
USP48-215ENST00000534705 LRRTM4Q86VH4 590 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 SFTPA2Q8IWL1 248 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 CLIP4Q8N3C7 705 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 DNAAF1Q8NEP3 725 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 OR14A16Q8NHC5 309 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 ADAMTS14Q8WXS8 1223 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 CNOT9Q92600 299 aaKnown RBP3.6□□□□□ -1.83
USP48-215ENST00000534705 ATOH1Q92858 354 aaPredicted RBP3.6□□□□□ -1.83
USP48-215ENST00000534705 NEUROG1Q92886 237 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 MED30Q96HR3 178 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 MPP4Q96JB8 637 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 FAM84BQ96KN1 310 aaPredicted RBP3.6□□□□□ -1.83
USP48-215ENST00000534705 NAP1L5Q96NT1 182 aaPredicted RBP3.6□□□□□ -1.83
USP48-215ENST00000534705 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.6□□□□□ -1.83
USP48-215ENST00000534705 TEX13AQ9BXU3 409 aaPredicted RBP3.6□□□□□ -1.83
USP48-215ENST00000534705 LHPPQ9H008 270 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 CHMP4BQ9H444 224 aaKnown RBP3.6□□□□□ -1.83
USP48-215ENST00000534705 BABAM1Q9NWV8 329 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 ANKRD10Q9NXR5 420 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 ALKBH4Q9NXW9 302 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 PGAP2Q9UHJ9 254 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 AGO1Q9UL18 857 aaKnown RBP3.6□□□□□ -1.83
USP48-215ENST00000534705 RABGAP1Q9Y3P9 1069 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 ARAP2Q8WZ64 1704 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 CDK5RAP2Q96SN8 1893 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 RIC1Q4ADV7 1423 aa3.6□□□□□ -1.83
USP48-215ENST00000534705 DUOX1Q9NRD9 1551 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 COL4A5P29400 1685 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 LAMB1P07942 1786 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 ARHGAP10A1A4S6 786 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 CBY3A6NI87 242 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 ACOT8O14734 319 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 PER2O15055 1255 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 GUCY1B2O75343 617 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 FRAT2O75474 233 aaPredicted RBP3.59□□□□□ -1.83
USP48-215ENST00000534705 RNASEH2AO75792 299 aaKnown RBP3.59□□□□□ -1.83
USP48-215ENST00000534705 STARD3NLO95772 234 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 IGKV3-20P01619 116 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 PRSS2P07478 247 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 ACAA1P09110 424 aaPredicted RBP3.59□□□□□ -1.83
USP48-215ENST00000534705 FGF3P11487 239 aaPredicted RBP3.59□□□□□ -1.83
USP48-215ENST00000534705 DPEP1P16444 411 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 PTPN2P17706 415 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 PSMC2P35998 433 aaKnown RBP3.59□□□□□ -1.83
USP48-215ENST00000534705 DSCR9P59020 149 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 TLE2Q04725 743 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.59□□□□□ -1.83
USP48-215ENST00000534705 TBX2Q13207 712 aaPredicted RBP3.59□□□□□ -1.83
USP48-215ENST00000534705 LPIN1Q14693 890 aa3.59□□□□□ -1.83
USP48-215ENST00000534705 HLFQ16534 295 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms