RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	TEX101	Q9BY14	249 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	WDR26	Q9H7D7	661 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	CYP4F12	Q9HCS2	524 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	MRPL40	Q9NQ50	206 aa	Known RBP	11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	FOXJ2	Q9P0K8	574 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	PYCARD	Q9ULZ3	195 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	PCDHGA3	Q9Y5H0	932 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	EEF2K	O00418	725 aa	Known RBP	11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	HTRA2	O43464	458 aa	Predicted RBP	11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	FUCA1	P04066	466 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	PRKCG	P05129	697 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	FGF1	P05230	155 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	CEACAM5	P06731	702 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	CCDC172	P0C7W6	258 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	CD1C	P29017	333 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	CCZ1B	P86790	482 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	CCZ1	P86791	482 aa	Predicted RBP	11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	OGDH	Q02218	1023 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	SRSF6	Q13247	344 aa	Known RBP	11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	MAMLD1	Q13495	774 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	PEX6	Q13608	980 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	TCEA2	Q15560	299 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	PLEKHA7	Q6IQ23	1121 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	DCUN1D2	Q6PH85	259 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	PRICKLE2	Q7Z3G6	844 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	NRROS	Q86YC3	692 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	SFTPA2	Q8IWL1	248 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	LZTR1	Q8N653	840 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	NEK11	Q8NG66	645 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	CCL4L1	Q8NHW4	92 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	CPLX3	Q8WVH0	158 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	CELF6	Q96J87	481 aa	Known RBP	11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	NSMCE3	Q96MG7	304 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	ZNF599	Q96NL3	588 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	PANX2	Q96RD6	677 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	ERGIC2	Q96RQ1	377 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	DPYSL5	Q9BPU6	564 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	SYT11	Q9BT88	431 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	CINP	Q9BW66	212 aa	Predicted RBP	11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	GSDMC	Q9BYG8	508 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	ADNP	Q9H2P0	1102 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	SEMA6C	Q9H3T2	930 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	AP4E1	Q9UPM8	1137 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	SCN8A	Q9UQD0	1980 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	UNC13C	Q8NB66	2214 aa		11.54	□□□□□ -0.56
CTNND1-238	ENST00000534647	NAV2	Q8IVL1	2488 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647		B4DGG1	531 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	STMND1	H3BQB6	276 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	PSMD11	O00231	422 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	MFAP3L	O75121	409 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	KRT10	P13645	584 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	ERCC2	P18074	760 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	WT1	P19544	449 aa	Predicted RBP	11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	HSPA9	P38646	679 aa	Known RBP	11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	SCNN1B	P51168	640 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	MAPK10	P53779	464 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	ILF3	Q12906	894 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	C16orf72	Q14CZ0	275 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	ACOX1	Q15067	660 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	PHF19	Q5T6S3	580 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	C16orf46	Q6P387	395 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	RFX8	Q6ZV50	586 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	PELI3	Q8N2H9	469 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	ARFGAP1	Q8N6T3	406 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	FNIP1	Q8TF40	1166 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	SCARF2	Q96GP6	870 aa	Predicted RBP	11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	TAAR9	Q96RI9	348 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	BAG1	Q99933	345 aa	Predicted RBP	11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	SLC12A9	Q9BXP2	914 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	CDH19	Q9H159	772 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	PARVA	Q9NVD7	372 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	PCDHGB7	Q9Y5F8	929 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	LRRK1	Q38SD2	2015 aa		11.53	□□□□□ -0.56
CTNND1-238	ENST00000534647	IGHV5-10-1	A0A0J9YXX1	117 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	TMEM191C	A6NGB0	347 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	CYSRT1	A8MQ03	144 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	RHPN2P1	A8MT19	583 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	PYCARD-AS1	I3L0S3	204 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	DAPK3	O43293	454 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	SOCS5	O75159	536 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	PPFIA2	O75334	1257 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	HEXIM1	O94992	359 aa	Known RBP	11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	FAM87A	P0C7U9	286 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	FGF3	P11487	239 aa	Predicted RBP	11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	CCL4	P13236	92 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	FER	P16591	822 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	CR2	P20023	1033 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	NFKBIA	P25963	317 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	CASP14	P31944	242 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	LIMK2	P53671	638 aa		11.52	□□□□□ -0.57

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