RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ADAMTSL4Q6UY14 1074 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 LYSMD3Q7Z3D4 306 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 SLCO6A1Q86UG4 719 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 GKN2Q86XP6 184 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 RAVER1Q8IY67 606 aaKnown RBP13.34□□□□□ -0.27
CAPN1-227ENST00000533909 CBARPQ8N350 705 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-227ENST00000533909 CHCHD4Q8N4Q1 142 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 FAM71DQ8N9W8 422 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 CCDC110Q8TBZ0 833 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 ADAMTS14Q8WXS8 1223 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 PDXPQ96GD0 296 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 OXNAD1Q96HP4 312 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-227ENST00000533909 TBATAQ96M53 351 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 SPATA13Q96N96 652 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 TEX101Q9BY14 249 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 CARD9Q9H257 536 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 TCEAL2Q9H3H9 227 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-227ENST00000533909 ZNF711Q9Y462 761 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 ASMTLO95671 621 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 FGF1P05230 155 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 HLA-DPA1P20036 260 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 MSNP26038 577 aaKnown RBP13.33□□□□□ -0.28
CAPN1-227ENST00000533909 PSMB4P28070 264 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 TEAD1P28347 426 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 ACTN2P35609 894 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 SPINT3P49223 89 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 CDK3Q00526 305 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 ILKQ13418 452 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 PROX2Q3B8N5 592 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 SIRPB2Q5JXA9 342 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 ALS2CLQ60I27 953 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 KDELC1Q6UW63 502 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 RFLNAQ6ZTI6 216 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 TAF8Q7Z7C8 310 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 PELI3Q8N2H9 469 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 SDR16C5Q8N3Y7 309 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 BLOC1S5Q8TDH9 187 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 OR1E3Q8WZA6 343 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 TADA1Q96BN2 335 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 HIC2Q96JB3 615 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 APOLD1Q96LR9 279 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 FICDQ9BVA6 458 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 SCNM1Q9BWG6 230 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 LGR4Q9BXB1 951 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 SPATA16Q9BXB7 569 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 FRMD8P1Q9BZ68 369 aaPredicted RBP13.33□□□□□ -0.28
CAPN1-227ENST00000533909 CDH19Q9H159 772 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 TRABDQ9H4I3 376 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 CARS2Q9HA77 564 aaKnown RBP13.33□□□□□ -0.28
CAPN1-227ENST00000533909 USP29Q9HBJ7 922 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 FGF22Q9HCT0 170 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 HACD3Q9P035 362 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 ZNF148Q9UQR1 794 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 R3HDM2Q9Y2K5 976 aaKnown RBP13.33□□□□□ -0.28
CAPN1-227ENST00000533909 PCDHGA1Q9Y5H4 931 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 DGKBQ9Y6T7 804 aa13.33□□□□□ -0.28
CAPN1-227ENST00000533909 LOC285095A0A1B0GVY8 99 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 TCRBV7S2A1N4TA0A589 114 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 PRSS38A1L453 326 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 TPP1O14773 563 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 INPP4BO15327 924 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 YY2O15391 372 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 GCATO75600 419 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 SPINK2P20155 84 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 GNPDA1P46926 289 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 ACADVLP49748 655 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 SHC2P98077 582 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 ILF3Q12906 894 aaKnown RBP eCLIP13.32□□□□□ -0.28
CAPN1-227ENST00000533909 KLF1Q13351 362 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-227ENST00000533909 NR0B2Q15466 257 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 SLC1A5Q15758 541 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 P3H1Q32P28 736 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 ZNF569Q5MCW4 686 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 DHRS13Q6UX07 377 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 GLT6D1Q7Z4J2 308 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 RAB44Q7Z6P3 723 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-227ENST00000533909 NLRP8Q86W28 1048 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 SLC13A5Q86YT5 568 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-227ENST00000533909 GALNT15Q8N3T1 639 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 MAIP1Q8WWC4 291 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 ATG4AQ8WYN0 398 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 MRGPRX2Q96LB1 330 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 ZSCAN5AQ9BUG6 496 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 ABCG4Q9H172 646 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 CAAP1Q9H8G2 361 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 MRPL40Q9NQ50 206 aaKnown RBP13.32□□□□□ -0.28
CAPN1-227ENST00000533909 TOR4AQ9NXH8 423 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 GULP1Q9UBP9 304 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 PNMA8BQ9ULN7 279 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-227ENST00000533909 GPR34Q9UPC5 381 aa13.32□□□□□ -0.28
CAPN1-227ENST00000533909 COL5A1P20908 1838 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-227ENST00000533909 ARID1BQ8NFD5 2236 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-227ENST00000533909 CPED1A4D0V7 1026 aa13.31□□□□□ -0.28
CAPN1-227ENST00000533909 C5orf60A6NFR6 353 aa13.31□□□□□ -0.28
CAPN1-227ENST00000533909 KIF5CO60282 957 aa13.31□□□□□ -0.28
CAPN1-227ENST00000533909 CEP104O60308 925 aa13.31□□□□□ -0.28
CAPN1-227ENST00000533909 TOP3BO95985 862 aaKnown RBP13.31□□□□□ -0.28
CAPN1-227ENST00000533909 AGTP01019 485 aa13.31□□□□□ -0.28
CAPN1-227ENST00000533909 IFNB1P01574 187 aa13.31□□□□□ -0.28
CAPN1-227ENST00000533909 CKMT1AP12532 417 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms