RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, human

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-222	ENST00000533733	MYRFL	Q96LU7	910 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	TSC22D3	Q99576	134 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	TDRD1	Q9BXT4	1180 aa	Known RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	TRIM15	Q9C019	465 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	MUC13	Q9H3R2	512 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	EBF3	Q9H4W6	596 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	PLXNA4	Q9HCM2	1894 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	PLK2	Q9NYY3	685 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	TRPM5	Q9NZQ8	1165 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	AFF4	Q9UHB7	1163 aa	Known RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	RIMS3	Q9UJD0	308 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	TBC1D30	Q9Y2I9	924 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	PCDHGA7	Q9Y5G6	932 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	ANAPC1	Q9H1A4	1944 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	MRAS	O14807	208 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	MUSK	O15146	869 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	TRIM24	O15164	1050 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	KLK8	O60259	260 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	SORBS2	O94875	1100 aa	Known RBP	11.93	□□□□□ -0.5
ATM-222	ENST00000533733	MLYCD	O95822	493 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	CHEK2	O96017	543 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	GFAP	P14136	432 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	ATF6	P18850	670 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	AQP4	P55087	323 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	PRMT2	P55345	433 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	RHD	Q02161	417 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	GALNT3	Q14435	633 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	UGT3A2	Q3SY77	523 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	INO80D	Q53TQ3	878 aa	Predicted RBP	11.93	□□□□□ -0.5
ATM-222	ENST00000533733	ADGRF1	Q5T601	910 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	LPCAT4	Q643R3	524 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	OGFOD2	Q6N063	350 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	C8orf82	Q6P1X6	216 aa	Predicted RBP	11.93	□□□□□ -0.5
ATM-222	ENST00000533733	SPATA19	Q7Z5L4	167 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	CIR1	Q86X95	450 aa	Predicted RBP	11.93	□□□□□ -0.5
ATM-222	ENST00000533733	TICAM1	Q8IUC6	712 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	FBXO39	Q8N4B4	442 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	SLAIN1	Q8ND83	568 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	HIPK4	Q8NE63	616 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	DBF4B	Q8NFT6	615 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	OR13C4	Q8NGS5	318 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	SHKBP1	Q8TBC3	707 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	GPR152	Q8TDT2	470 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	RMDN1	Q96DB5	314 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	MOCOS	Q96EN8	888 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	DCUN1D1	Q96GG9	259 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	NPAS2	Q99743	824 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	GID8	Q9NWU2	228 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	ADA2	Q9NZK5	511 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	TMEM181	Q9P2C4	612 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	RNF112	Q9ULX5	631 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	OAS3	Q9Y6K5	1087 aa	Known RBP	11.93	□□□□□ -0.5
ATM-222	ENST00000533733	MICAL3	Q7RTP6	2002 aa		11.93	□□□□□ -0.5
ATM-222	ENST00000533733	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.93	□□□□□ -0.5
ATM-222	ENST00000533733	ZNF840P	A6NDX5	716 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733		H3BNC9	293 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	NBN	O60934	754 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	CDK14	O94921	469 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	IDO1	P14902	403 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	LBP	P18428	481 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	SLC6A4	P31645	630 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	KCNQ1	P51787	676 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	CHN2	P52757	468 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	PLK1	P53350	603 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	MRPS22	P82650	360 aa	Known RBP	11.92	□□□□□ -0.5
ATM-222	ENST00000533733	TIAL1	Q01085	375 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
ATM-222	ENST00000533733	FOLH1	Q04609	750 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	MAP7D1	Q3KQU3	841 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	LHX8	Q68G74	356 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	CRIPAK	Q8N1N5	446 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	MIER2	Q8N344	545 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	OR52K2	Q8NGK3	314 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	TWIST2	Q8WVJ9	160 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	ZUFSP	Q96AP4	578 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	ZNF512	Q96ME7	567 aa	Predicted RBP	11.92	□□□□□ -0.5
ATM-222	ENST00000533733	UNK	Q9C0B0	810 aa	Known RBP	11.92	□□□□□ -0.5
ATM-222	ENST00000533733	CRISPLD1	Q9H336	500 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	EPB41L1	Q9H4G0	881 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	MID1IP1	Q9NPA3	183 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	STOML2	Q9UJZ1	356 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	AGO1	Q9UL18	857 aa	Known RBP	11.92	□□□□□ -0.5
ATM-222	ENST00000533733	MAFF	Q9ULX9	164 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	FIS1	Q9Y3D6	152 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	KCTD3	Q9Y597	815 aa		11.92	□□□□□ -0.5
ATM-222	ENST00000533733	SMIM31	A0A1B0GVY4	71 aa		11.91	□□□□□ -0.5
ATM-222	ENST00000533733	UBA6	A0AVT1	1052 aa	Predicted RBP	11.91	□□□□□ -0.5
ATM-222	ENST00000533733	GRXCR2	A6NFK2	248 aa		11.91	□□□□□ -0.5
ATM-222	ENST00000533733	OR51F1	A6NGY5	319 aa		11.91	□□□□□ -0.5
ATM-222	ENST00000533733	UBFD1	O14562	309 aa	Known RBP	11.91	□□□□□ -0.5
ATM-222	ENST00000533733	GIPC1	O14908	333 aa		11.91	□□□□□ -0.5
ATM-222	ENST00000533733	EFEMP2	O95967	443 aa		11.91	□□□□□ -0.5
ATM-222	ENST00000533733	SLC4A1	P02730	911 aa		11.91	□□□□□ -0.5
ATM-222	ENST00000533733	RPS17	P08708	135 aa	Known RBP	11.91	□□□□□ -0.5
ATM-222	ENST00000533733	UBTFL6	P0CB48	400 aa	Predicted RBP	11.91	□□□□□ -0.5
ATM-222	ENST00000533733	MTHFD2	P13995	350 aa		11.91	□□□□□ -0.5
ATM-222	ENST00000533733	PKM	P14618	531 aa	Known RBP	11.91	□□□□□ -0.5
ATM-222	ENST00000533733	DPP6	P42658	865 aa		11.91	□□□□□ -0.5
ATM-222	ENST00000533733	PTGER3	P43115	390 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms