RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SUFUQ9UMX1 484 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 TMEM98Q9Y2Y6 226 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 PPIL1Q9Y3C6 166 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 ENTPD2Q9Y5L3 495 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 A0A087WV48 116 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 PMS2P1A4D2B8 440 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 ZNF487B1APH4 448 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 NOBOXO60393 691 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 TCEA3O75764 348 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 PRLP01236 227 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 MMP2P08253 660 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 PIRTP0C851 137 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 ZFXP17010 805 aaPredicted RBP10.4□□□□□ -0.74
CAPN1-225ENST00000533704 CYLC1P35663 651 aaPredicted RBP10.4□□□□□ -0.74
CAPN1-225ENST00000533704 LSSP48449 732 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 STC1P52823 247 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 MAZP56270 477 aaKnown RBP10.4□□□□□ -0.74
CAPN1-225ENST00000533704 SKOR1P84550 965 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 PTSQ03393 145 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 QPCTQ16769 361 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 C14orf28Q4W4Y0 310 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 LRRC38Q5VT99 294 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 CCNJLQ8IV13 435 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 CBARPQ8N350 705 aaPredicted RBP10.4□□□□□ -0.74
CAPN1-225ENST00000533704 CNTD1Q8N815 330 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 GPR156Q8NFN8 814 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 SNIP1Q8TAD8 396 aaKnown RBP10.4□□□□□ -0.74
CAPN1-225ENST00000533704 WDR48Q8TAF3 677 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 KIAA1524Q8TCG1 905 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 ZDHHC1Q8WTX9 485 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 HIC2Q96JB3 615 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 AGAP2Q99490 1192 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 MLPHQ9BV36 600 aaPredicted RBP10.4□□□□□ -0.74
CAPN1-225ENST00000533704 ADGRE3Q9BY15 652 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 BRD8Q9H0E9 1235 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 LRRN3Q9H3W5 708 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 SPATS2LQ9NUQ6 558 aaKnown RBP10.4□□□□□ -0.74
CAPN1-225ENST00000533704 SAE1Q9UBE0 346 aaPredicted RBP10.4□□□□□ -0.74
CAPN1-225ENST00000533704 DNPEPQ9ULA0 475 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 ATXN7L1Q9ULK2 861 aaPredicted RBP10.4□□□□□ -0.74
CAPN1-225ENST00000533704 PCDHA13Q9Y5I0 950 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 RNF215Q9Y6U7 377 aa10.4□□□□□ -0.74
CAPN1-225ENST00000533704 IGSF10Q6WRI0 2623 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 CCDC187A0A096LP49 1063 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 D6RAR5 112 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 F5H423 210 aaPredicted RBP10.39□□□□□ -0.75
CAPN1-225ENST00000533704 PSTPIP1O43586 416 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 CST8O60676 142 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 SOD1P00441 154 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 FUCA1P04066 466 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 ADCY8P40145 1251 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 ACTR1BP42025 376 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 PPM1FP49593 454 aaPredicted RBP10.39□□□□□ -0.75
CAPN1-225ENST00000533704 ZNF75DP51815 510 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 NAP1L1P55209 391 aaKnown RBP10.39□□□□□ -0.75
CAPN1-225ENST00000533704 PCBP4P57723 403 aaKnown RBP10.39□□□□□ -0.75
CAPN1-225ENST00000533704 ACTR1AP61163 376 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 RPL26P61254 145 aaKnown RBP10.39□□□□□ -0.75
CAPN1-225ENST00000533704 CTBSQ01459 385 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 DPTQ07507 201 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 TFDP2Q14188 446 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 CERCAMQ5T4B2 595 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 ALS2CLQ60I27 953 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 ADAMTSL4Q6UY14 1074 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 SPOCD1Q6ZMY3 1216 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 ZNF765Q7L2R6 523 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 LYSMD3Q7Z3D4 306 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 B3GNT8Q7Z7M8 397 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 NT5DC3Q86UY8 548 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 VSIG1Q86XK7 387 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 NRROSQ86YC3 692 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 NRSN1Q8IZ57 195 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 LSMEM2Q8N112 164 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 OR6C4Q8NGE1 309 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 WDR36Q8NI36 951 aaKnown RBP10.39□□□□□ -0.75
CAPN1-225ENST00000533704 CCHCR1Q8TD31 782 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 GPBAR1Q8TDU6 330 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 HAUS1Q96CS2 278 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 ZNF578Q96N58 590 aaPredicted RBP10.39□□□□□ -0.75
CAPN1-225ENST00000533704 OLFM3Q96PB7 478 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 OR2M4Q96R27 311 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 STRADBQ9C0K7 418 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 RBSNQ9H1K0 784 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 LUC7LQ9NQ29 371 aaKnown RBP10.39□□□□□ -0.75
CAPN1-225ENST00000533704 THSD1Q9NS62 852 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 PKD2L2Q9NZM6 624 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 TAAR2Q9P1P5 351 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 LRIT1Q9P2V4 623 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 RPL26L1Q9UNX3 145 aaKnown RBP10.39□□□□□ -0.75
CAPN1-225ENST00000533704 SHOC2Q9UQ13 582 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 PLEKHM1Q9Y4G2 1056 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 ALG6Q9Y672 507 aa10.39□□□□□ -0.75
CAPN1-225ENST00000533704 AHCTF1Q8WYP5 2266 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 NBEAQ8NFP9 2946 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 CELSR3Q9NYQ7 3312 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 A0A1W2PNU3 283 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-225ENST00000533704 A0A1W2PQM1 296 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 SOWAHDA6NJG2 315 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 RHPN2P1A8MT19 583 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 ANKRD66B4E2M5 251 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms