RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 SEPT6Q14141 434 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 FRG1Q14331 258 aaKnown RBP13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 CNGA3Q16281 694 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 TTC31Q49AM3 519 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 CES3Q6UWW8 571 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 CAPN12Q6ZSI9 719 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 RFLNAQ6ZTI6 216 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 USP30Q70CQ3 517 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 GLT6D1Q7Z4J2 308 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 PGBD3Q8N328 593 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 BRSK1Q8TDC3 778 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 GANCQ8TET4 914 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 CFAP36Q96G28 342 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 WRAP53Q9BUR4 548 aaKnown RBP13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 ITM2CQ9NQX7 267 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 SLC2A6Q9UGQ3 507 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 MBD1Q9UIS9 605 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 SCML1Q9UN30 329 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 INVSQ9Y283 1065 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 TCAF1Q9Y4C2 921 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 PLXNA2O75051 1894 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 CCL22O00626 93 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 PLRG1O43660 514 aaKnown RBP13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 IGLV3-19P01714 112 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 POLBP06746 335 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 C1SP09871 688 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 BCKDHBP21953 392 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 XPAP23025 273 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 NMBRP28336 390 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 VIPR1P32241 457 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 ACSL1P33121 698 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 NBL1P41271 181 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 ZNF140P52738 457 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 NHLH1Q02575 133 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 PTSQ03393 145 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 NAB1Q13506 487 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 SKIDA1Q1XH10 827 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 GLIPR1L2Q4G1C9 344 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 PCID2Q5JVF3 399 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 LGSNQ5TDP6 509 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 CASC4Q6P4E1 433 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 UNC5AQ6ZN44 842 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 HSD11B1LQ7Z5J1 315 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 EXOC3L1Q86VI1 746 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 LRRC6Q86X45 466 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 CBARPQ8N350 705 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 OR13C4Q8NGS5 318 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 SLC44A1Q8WWI5 657 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 GAB3Q8WWW8 586 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 MFSD3Q96ES6 412 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 FCRL3Q96P31 734 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 RANBP9Q96S59 729 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 KIFC1Q9BW19 673 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 MOCS1Q9NZB8 636 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 ZNF180Q9UJW8 692 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 FZD4Q9ULV1 537 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 SOX13Q9UN79 622 aa13.4□□□□□ -0.26
TRAPPC4-214ENST00000533632 IGHV1OR15-9A0A0B4J2B8 117 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 GOLGA8CPA6NN73 597 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 SRRM3A6NNA2 597 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 AP1G1O43747 822 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 INHBAP08476 426 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 ACADMP11310 421 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 ADRA1DP25100 572 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 MDH1P40925 334 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 ARSDP51689 593 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 TAF1AQ15573 450 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 TMEM52BQ4KMG9 183 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 SPANXN3Q5MJ09 141 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 ERAP2Q6P179 960 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 LIPIQ6XZB0 460 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 SLC26A11Q86WA9 606 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 OR13J1Q8NGT2 312 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 OR14C36Q8NHC7 312 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 PTCD2Q8WV60 388 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 ATOH1Q92858 354 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 RAB7BQ96AH8 199 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 CENPTQ96BT3 561 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 DNAJC1Q96KC8 554 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 PAFAH2Q99487 392 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 ZFYVE1Q9HBF4 777 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 BPIFA1Q9NP55 256 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 TREX1Q9NSU2 369 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 HACD3Q9P035 362 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 CYP8B1Q9UNU6 501 aa13.39□□□□□ -0.27
TRAPPC4-214ENST00000533632 IQANK1A0A1B0GTG1 560 aa13.38□□□□□ -0.27
TRAPPC4-214ENST00000533632 HEATR9A2RTY3 570 aa13.38□□□□□ -0.27
TRAPPC4-214ENST00000533632 FAM159BA6NKW6 160 aa13.38□□□□□ -0.27
TRAPPC4-214ENST00000533632 C10orf142B7Z368 130 aa13.38□□□□□ -0.27
TRAPPC4-214ENST00000533632 MMP20O60882 483 aa13.38□□□□□ -0.27
TRAPPC4-214ENST00000533632 CYP2A6P11509 494 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-214ENST00000533632 HMGCLP35914 325 aa13.38□□□□□ -0.27
TRAPPC4-214ENST00000533632 LIG3P49916 1009 aa13.38□□□□□ -0.27
TRAPPC4-214ENST00000533632 ATP1A2P50993 1020 aa13.38□□□□□ -0.27
TRAPPC4-214ENST00000533632 SUOXP51687 545 aa13.38□□□□□ -0.27
TRAPPC4-214ENST00000533632 STC1P52823 247 aa13.38□□□□□ -0.27
TRAPPC4-214ENST00000533632 PPP2CBP62714 309 aa13.38□□□□□ -0.27
TRAPPC4-214ENST00000533632 PPP2CAP67775 309 aa13.38□□□□□ -0.27
TRAPPC4-214ENST00000533632 ELP6Q0PNE2 266 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms