RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 CCNYQ8ND76 341 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 ZDHHC1Q8WTX9 485 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 AP2M1Q96CW1 435 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 FRMD8Q9BZ67 464 aaPredicted RBP12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 SUDS3Q9H7L9 328 aaPredicted RBP12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 CPNE5Q9HCH3 593 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 SPATS2LQ9NUQ6 558 aaKnown RBP12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 TAAR2Q9P1P5 351 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 SUFUQ9UMX1 484 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 NENFQ9UMX5 172 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 RPL26L1Q9UNX3 145 aaKnown RBP12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 SLC17A4Q9Y2C5 497 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 TTLL3Q9Y4R7 772 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 PCDHGA7Q9Y5G6 932 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 RNF215Q9Y6U7 377 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 LRP4O75096 1905 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 SSU72P8A0A1W2PR75 194 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 RHPN2P1A8MT19 583 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 ERVH48-1M5A8F1 160 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 AKR1B10O60218 316 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 FUCA1P04066 466 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 IVLP07476 585 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 MAN1A1P33908 653 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 UGT1A5P35504 534 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 DSC2Q02487 901 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 ZFP36L1Q07352 338 aaKnown RBP12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 PTPRRQ15256 657 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 ADAMTSL4Q6UY14 1074 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 ZNF765Q7L2R6 523 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 SPRED1Q7Z699 444 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 PIM3Q86V86 326 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 NRROSQ86YC3 692 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 EXD1Q8NHP7 514 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 FAF2Q96CS3 445 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 ZNF830Q96NB3 372 aaPredicted RBP12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 DNAJC7Q99615 494 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 CMKLR1Q99788 373 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 MAK16Q9BXY0 300 aaKnown RBP12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 ABCG8Q9H221 673 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 AKAP7Q9P0M2 348 aaPredicted RBP12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 CD84Q9UIB8 345 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 CHKBQ9Y259 395 aa12.37□□□□□ -0.43
CAPRIN1-213ENST00000533562 COL27A1Q8IZC6 1860 aaPredicted RBP12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 ZNF462Q96JM2 2506 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 PMS2P1A4D2B8 440 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 CAPN8A6NHC0 703 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 NVLO15381 856 aaKnown RBP12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 MAP3K6O95382 1288 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 ECEL1O95672 775 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 CPNE6O95741 557 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 TMEM253P0C7T8 217 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 KDELR1P24390 212 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 ALDH4A1P30038 563 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 SLC5A2P31639 672 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 ADCY8P40145 1251 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 ARHGAP25P42331 645 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 GPR3P46089 330 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 POLD2P49005 469 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 TAS2R40P59535 323 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 B4GALNT1Q00973 533 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 CTBSQ01459 385 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 GBE1Q04446 702 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 MESDQ14696 234 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 CLPPQ16740 277 aaPredicted RBP12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 ASTE1Q2TB18 679 aaPredicted RBP12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 TAF1BQ53T94 588 aaPredicted RBP12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 SLC30A9Q6PML9 568 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 CCDC81Q6ZN84 652 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 C17orf82Q86X59 251 aaPredicted RBP12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 JAMLQ86YT9 394 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 SFTPA2Q8IWL1 248 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 CCDC13Q8IYE1 715 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 PQLC3Q8N755 202 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 SLC35G2Q8TBE7 412 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 ARRDC2Q8TBH0 407 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 CCHCR1Q8TD31 782 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 SNRNP27Q8WVK2 155 aaKnown RBP12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 SCAMP4Q969E2 229 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 HDAC11Q96DB2 347 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 WBP1Q96G27 269 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 SCARF2Q96GP6 870 aaPredicted RBP12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 CCDC42Q96M95 316 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 RNF157Q96PX1 679 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 TDRD1Q9BXT4 1180 aaKnown RBP12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 PACSIN1Q9BY11 444 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 ADGRE3Q9BY15 652 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 CDH19Q9H159 772 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 PCDH9Q9HC56 1237 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 DTLQ9NZJ0 730 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 ATXN7L1Q9ULK2 861 aaPredicted RBP12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 LOXL2Q9Y4K0 774 aa12.36□□□□□ -0.43
CAPRIN1-213ENST00000533562 A0A0U1RQS6 177 aa12.35□□□□□ -0.43
CAPRIN1-213ENST00000533562 ZNF487B1APH4 448 aa12.35□□□□□ -0.43
CAPRIN1-213ENST00000533562 B4GAT1O43505 415 aa12.35□□□□□ -0.43
CAPRIN1-213ENST00000533562 CLDN7O95471 211 aa12.35□□□□□ -0.43
CAPRIN1-213ENST00000533562 PRLP01236 227 aa12.35□□□□□ -0.43
CAPRIN1-213ENST00000533562 JCHAINP01591 159 aa12.35□□□□□ -0.43
CAPRIN1-213ENST00000533562 AK4P27144 223 aaPredicted RBP12.35□□□□□ -0.43
CAPRIN1-213ENST00000533562 ACTR1BP42025 376 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms