RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 RFLNAQ6ZTI6 216 aa22.78■■□□□ 1.24
PKP3-210ENST00000533249 NAGSQ8N159 534 aa22.78■■□□□ 1.24
PKP3-210ENST00000533249 JPH3Q8WXH2 748 aaPredicted RBP22.78■■□□□ 1.24
PKP3-210ENST00000533249 CCDC74BQ96LY2 380 aa22.78■■□□□ 1.24
PKP3-210ENST00000533249 MCCC1Q96RQ3 725 aaPredicted RBP22.78■■□□□ 1.24
PKP3-210ENST00000533249 ISCUQ9H1K1 167 aa22.78■■□□□ 1.24
PKP3-210ENST00000533249 NT5MQ9NPB1 228 aa22.78■■□□□ 1.24
PKP3-210ENST00000533249 SLC17A4Q9Y2C5 497 aa22.78■■□□□ 1.24
PKP3-210ENST00000533249 PLEKHM1Q9Y4G2 1056 aa22.78■■□□□ 1.24
PKP3-210ENST00000533249 PCDHGA4Q9Y5G9 962 aa22.78■■□□□ 1.24
PKP3-210ENST00000533249 IGHV5-10-1A0A0J9YXX1 117 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 IVLP07476 585 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 WT1P19544 449 aaPredicted RBP22.77■■□□□ 1.24
PKP3-210ENST00000533249 CD1CP29017 333 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 ACTR1BP42025 376 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 ACTR1AP61163 376 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 ITKQ08881 620 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 NR1D2Q14995 579 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 RALGPS1Q5JS13 557 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 NKAIN2Q5VXU1 208 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 TECPR1Q7Z6L1 1165 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 DTX1Q86Y01 620 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 ZSCAN1Q8NBB4 408 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 PIH1D2Q8WWB5 315 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 BTBD6Q96KE9 485 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 NAP1L5Q96NT1 182 aaPredicted RBP22.77■■□□□ 1.24
PKP3-210ENST00000533249 SMIM14Q96QK8 99 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 FAM117AQ9C073 453 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 TMEM98Q9Y2Y6 226 aa22.77■■□□□ 1.24
PKP3-210ENST00000533249 HEMK1Q9Y5R4 338 aaPredicted RBP22.77■■□□□ 1.24
PKP3-210ENST00000533249 PPM1DO15297 605 aa22.76■■□□□ 1.23
PKP3-210ENST00000533249 ITGB2P05107 769 aa22.76■■□□□ 1.23
PKP3-210ENST00000533249 PDHA1P08559 390 aa22.76■■□□□ 1.23
PKP3-210ENST00000533249 CD82P27701 267 aa22.76■■□□□ 1.23
PKP3-210ENST00000533249 TEAD1P28347 426 aa22.76■■□□□ 1.23
PKP3-210ENST00000533249 PIGHQ14442 188 aaPredicted RBP22.76■■□□□ 1.23
PKP3-210ENST00000533249 KRT81Q14533 505 aa22.76■■□□□ 1.23
PKP3-210ENST00000533249 TDRD12Q587J7 1177 aaKnown RBP22.76■■□□□ 1.23
PKP3-210ENST00000533249 LRRC66Q68CR7 880 aa22.76■■□□□ 1.23
PKP3-210ENST00000533249 MARK2Q7KZI7 788 aaKnown RBP22.76■■□□□ 1.23
PKP3-210ENST00000533249 TRIM74Q86UV6 250 aa22.76■■□□□ 1.23
PKP3-210ENST00000533249 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.76■■□□□ 1.23
PKP3-210ENST00000533249 TEKT4Q8WW24 435 aa22.76■■□□□ 1.23
PKP3-210ENST00000533249 AP2M1Q96CW1 435 aa22.76■■□□□ 1.23
PKP3-210ENST00000533249 OR2M4Q96R27 311 aa22.76■■□□□ 1.23
PKP3-210ENST00000533249 SEMA3CQ99985 751 aa22.76■■□□□ 1.23
PKP3-210ENST00000533249 CDH19Q9H159 772 aa22.76■■□□□ 1.23
PKP3-210ENST00000533249 ABCG8Q9H221 673 aa22.76■■□□□ 1.23
PKP3-210ENST00000533249 MYO18BQ8IUG5 2567 aa22.75■■□□□ 1.23
PKP3-210ENST00000533249 A0A1B0GTH6 734 aa22.75■■□□□ 1.23
PKP3-210ENST00000533249 HGSO14964 777 aaPredicted RBP22.75■■□□□ 1.23
PKP3-210ENST00000533249 FAM87AP0C7U9 286 aa22.75■■□□□ 1.23
PKP3-210ENST00000533249 GPR3P46089 330 aa22.75■■□□□ 1.23
PKP3-210ENST00000533249 CYP4F2P78329 520 aa22.75■■□□□ 1.23
PKP3-210ENST00000533249 DPTQ07507 201 aa22.75■■□□□ 1.23
PKP3-210ENST00000533249 PEX6Q13608 980 aa22.75■■□□□ 1.23
PKP3-210ENST00000533249 CLPPQ16740 277 aaPredicted RBP22.75■■□□□ 1.23
PKP3-210ENST00000533249 NDUFAF2Q8N183 169 aa22.75■■□□□ 1.23
PKP3-210ENST00000533249 SCAMP4Q969E2 229 aa22.75■■□□□ 1.23
PKP3-210ENST00000533249 CLMPQ9H6B4 373 aa22.75■■□□□ 1.23
PKP3-210ENST00000533249 ANAPC7Q9UJX3 599 aa22.75■■□□□ 1.23
PKP3-210ENST00000533249 PPIL1Q9Y3C6 166 aa22.75■■□□□ 1.23
PKP3-210ENST00000533249 SDK2Q58EX2 2172 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 SOD1P00441 154 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 FGF3P11487 239 aaPredicted RBP22.74■■□□□ 1.23
PKP3-210ENST00000533249 MPSTP25325 297 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 SSR1P43307 286 aaKnown RBP22.74■■□□□ 1.23
PKP3-210ENST00000533249 PPM1FP49593 454 aaPredicted RBP22.74■■□□□ 1.23
PKP3-210ENST00000533249 LIMK2P53671 638 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 SLC25A11Q02978 314 aaKnown RBP22.74■■□□□ 1.23
PKP3-210ENST00000533249 MMRN1Q13201 1228 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 XKR5Q6UX68 686 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 ADAMTSL4Q6UY14 1074 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 PMEPA1Q969W9 287 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 TAAR9Q96RI9 348 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 B3GNT4Q9C0J1 378 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 ZMYND15Q9H091 742 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 THAP2Q9H0W7 228 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 GRPEL1Q9HAV7 217 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 KCNK4Q9NYG8 393 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 IP6K2Q9UHH9 426 aa22.74■■□□□ 1.23
PKP3-210ENST00000533249 TRBV23OR9-2A0A075B6M9 112 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 IGHV1OR21-1A0A087WYE8 117 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 STMND1H3BQB6 276 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 FZD6O60353 706 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 CSF2RBP32927 897 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 EPHB1P54762 984 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 FANCCQ00597 558 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 NFKB2Q00653 900 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 KCNC4Q03721 635 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 TBR1Q16650 682 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 TEX26Q8N6G2 289 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 NIPA2Q8N8Q9 360 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 HTR3CQ8WXA8 447 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 SCARF2Q96GP6 870 aaPredicted RBP22.73■■□□□ 1.23
PKP3-210ENST00000533249 AGAP2Q99490 1192 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 POLR1EQ9GZS1 481 aaKnown RBP22.73■■□□□ 1.23
PKP3-210ENST00000533249 TMEM9Q9P0T7 183 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 TTLL3Q9Y4R7 772 aa22.73■■□□□ 1.23
PKP3-210ENST00000533249 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms