RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 RAET1GQ6H3X3 334 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 KYAT3Q6YP21 454 aaKnown RBP11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 GCNT7Q6ZNI0 430 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 NLRP9Q7RTR0 991 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 PLA2G15Q8NCC3 412 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 GPR26Q8NDV2 337 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 PPHLN1Q8NEY8 458 aaKnown RBP11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 OR4K2Q8NGD2 314 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 STYXQ8WUJ0 223 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 SCAMP4Q969E2 229 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 RANBP9Q96S59 729 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 C19orf43Q9BQ61 176 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 LRRC1Q9BTT6 524 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 APOOQ9BUR5 198 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 FRMD8Q9BZ67 464 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 ZDHHC5Q9C0B5 715 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 IL22Q9GZX6 179 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 ANKRD6Q9Y2G4 727 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 A0A1B0GVT2 93 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 MROH6A6NGR9 719 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 SDR42E2A6NKP2 422 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 PATE3B3GLJ2 98 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 K7ESM1 405 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 FOXD2O60548 495 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 AVILO75366 819 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 TMEM63AO94886 807 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 SEC31AO94979 1220 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 WNT1P04628 370 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 HOXC4P09017 264 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 MGAT1P26572 445 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 HTR1BP28222 390 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 TEAD1P28347 426 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 TRIM23P36406 574 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 SPAM1P38567 509 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 RPL21P46778 160 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 THOP1P52888 689 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 ITGA8P53708 1063 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 DRG2P55039 364 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 DCDC1P59894 354 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 SLC7A5Q01650 507 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 PTPRCAPQ14761 206 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 CSRP2Q16527 193 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 CCDC38Q502W7 563 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 HENMT1Q5T8I9 393 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 ARMC3Q5W041 872 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 ALS2CLQ60I27 953 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 DUPD1Q68J44 220 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 HIBCHQ6NVY1 386 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 IL27RAQ6UWB1 636 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 ASCL5Q7RTU5 278 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 PTAR1Q7Z6K3 402 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 CAND1Q86VP6 1230 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 ABCA7Q8IZY2 2146 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 DCLK2Q8N568 766 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 TRAM1L1Q8N609 369 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 GPR161Q8N6U8 529 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 OR13H1Q8NG92 308 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 DTX3LQ8TDB6 740 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 SERPINB12Q96P63 405 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 PLEKHG4BQ96PX9 1271 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 AGAP2Q99490 1192 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 ZSCAN5AQ9BUG6 496 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 SPATA16Q9BXB7 569 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 DPH5Q9H2P9 285 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 SMOC1Q9H4F8 434 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 WDR26Q9H7D7 661 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 L2HGDHQ9H9P8 463 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 CAPN10Q9HC96 672 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 IL26Q9NPH9 171 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 GDF3Q9NR23 364 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 PHPT1Q9NRX4 125 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 SEMA4GQ9NTN9 838 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 NLE1Q9NVX2 485 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 WHRNQ9P202 907 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 NFKBIL1Q9UBC1 381 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 APPL1Q9UKG1 709 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 FNDC3AQ9Y2H6 1198 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 OR1A2Q9Y585 309 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 KCTD3Q9Y597 815 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 EML5Q05BV3 1969 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 PLXND1Q9Y4D7 1925 aa11.19□□□□□ -0.62
TRAPPC4-211ENST00000533012 GLYATL1P3A0A0U1RQE8 302 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 CACNB4O00305 520 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 ARHGAP33O14559 1287 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 KELP23276 732 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 ZNF140P52738 457 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 ATXN3P54252 364 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 NXPH1P58417 271 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 TMPRSS15P98073 1019 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 CAV1Q03135 178 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 PDE1CQ14123 709 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 KIF19Q2TAC6 998 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 PDPK2PQ6A1A2 396 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 CASC4Q6P4E1 433 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 LAYNQ6UX15 382 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 ADAMTSL4Q6UY14 1074 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 ZNF534Q76KX8 674 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 PDIK1LQ8N165 341 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 NOA1Q8NC60 698 aaKnown RBP11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 OR13C4Q8NGS5 318 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms