RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 FAM46DQ8NEK8 389 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 SCAMP4Q969E2 229 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 SLC46A1Q96NT5 459 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 SUDS3Q9H7L9 328 aaPredicted RBP18.89■□□□□ 0.61
SSH3-209ENST00000532600 CARS2Q9HA77 564 aaKnown RBP18.89■□□□□ 0.61
SSH3-209ENST00000532600 PHPT1Q9NRX4 125 aaPredicted RBP18.89■□□□□ 0.61
SSH3-209ENST00000532600 AMACRQ9UHK6 382 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 LCMT1Q9UIC8 334 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 MOSPD1Q9UJG1 213 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 SUFUQ9UMX1 484 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 SLC17A4Q9Y2C5 497 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 TTLL3Q9Y4R7 772 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 RNF215Q9Y6U7 377 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 BPTFQ12830 3046 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 LRRD1A4D1F6 860 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 GRID2IPA4D2P6 1211 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 CAPN8A6NHC0 703 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 ZNF487B1APH4 448 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 B4DGG1 531 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 KCNK1O00180 336 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 RRP8O43159 456 aaKnown RBP18.88■□□□□ 0.61
SSH3-209ENST00000532600 JCHAINP01591 159 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 RPLP0P05388 317 aaKnown RBP18.88■□□□□ 0.61
SSH3-209ENST00000532600 PTMAP06454 111 aaKnown RBP18.88■□□□□ 0.61
SSH3-209ENST00000532600 STC1P52823 247 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 ERVPABLB-1P60509 514 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 SKOR1P84550 965 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 ARHGEF7Q14155 803 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 SPIDRQ14159 915 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 RAET1GQ6H3X3 334 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 NPNTQ6UXI9 565 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 LRRC69Q6ZNQ3 347 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 C17orf82Q86X59 251 aaPredicted RBP18.88■□□□□ 0.61
SSH3-209ENST00000532600 LSMEM2Q8N112 164 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 LRRC57Q8N9N7 239 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 WDR48Q8TAF3 677 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 GRAMD1AQ96CP6 724 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 SCARF2Q96GP6 870 aaPredicted RBP18.88■□□□□ 0.61
SSH3-209ENST00000532600 NAF1Q96HR8 494 aaKnown RBP18.88■□□□□ 0.61
SSH3-209ENST00000532600 WDR24Q96S15 920 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 SYNDIG1Q9H7V2 258 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 KCTD5Q9NXV2 234 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 APPL1Q9UKG1 709 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 PLEKHM1Q9Y4G2 1056 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 ALG6Q9Y672 507 aa18.88■□□□□ 0.61
SSH3-209ENST00000532600 MACROD2A1Z1Q3 448 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 GOLGA6CA6NDK9 693 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 GOLGA6BA6NDN3 693 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 D6RAR5 112 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 PDE2AO00408 941 aaPredicted RBP18.87■□□□□ 0.61
SSH3-209ENST00000532600 FGF1P05230 155 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 GOLGA6DP0CG33 693 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 MX2P20592 715 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 CES1P23141 567 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 AK4P27144 223 aaPredicted RBP18.87■□□□□ 0.61
SSH3-209ENST00000532600 GNPDA1P46926 289 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 PCBP4P57723 403 aaKnown RBP18.87■□□□□ 0.61
SSH3-209ENST00000532600 IFI35P80217 286 aaPredicted RBP18.87■□□□□ 0.61
SSH3-209ENST00000532600 KIF5AQ12840 1032 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 C14orf28Q4W4Y0 310 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 C11orf63Q6NUN7 778 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 ADAMTSL4Q6UY14 1074 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 B4GALNT4Q76KP1 1039 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 TMPRSS9Q7Z410 1059 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 TRIM74Q86UV6 250 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 Q8N9G6 341 aaPredicted RBP18.87■□□□□ 0.61
SSH3-209ENST00000532600 CCNYQ8ND76 341 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 LPCAT1Q8NF37 534 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 OLFM3Q96PB7 478 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 LYSMD1Q96S90 227 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 CEP41Q9BYV8 373 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 FOXP3Q9BZS1 431 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 LRRN3Q9H3W5 708 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 GOLGA6AQ9NYA3 693 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 ATXN7L1Q9ULK2 861 aaPredicted RBP18.87■□□□□ 0.61
SSH3-209ENST00000532600 TMEM98Q9Y2Y6 226 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 PCDHGA8Q9Y5G5 932 aa18.87■□□□□ 0.61
SSH3-209ENST00000532600 PCYT1BQ9Y5K3 369 aaPredicted RBP18.87■□□□□ 0.61
SSH3-209ENST00000532600 MGAQ8IWI9 3026 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 CDRT15L2A8MXV6 281 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 CLDN7O95471 211 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 GLB1P16278 677 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 ZNF30P17039 623 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 NFKBIAP25963 317 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 CD86P42081 329 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 MARCKSL1P49006 195 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 MAZP56270 477 aaKnown RBP18.86■□□□□ 0.61
SSH3-209ENST00000532600 QPCTQ16769 361 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 ZFYVE27Q5T4F4 411 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 ZNF765Q7L2R6 523 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 VSIG1Q86XK7 387 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 CCNJLQ8IV13 435 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 ZNF248Q8NDW4 579 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 AP2M1Q96CW1 435 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 EID2BQ96D98 161 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 COX14Q96I36 57 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 GFM1Q96RP9 751 aaKnown RBP18.86■□□□□ 0.61
SSH3-209ENST00000532600 BRD8Q9H0E9 1235 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 DPEP2Q9H4A9 486 aa18.86■□□□□ 0.61
SSH3-209ENST00000532600 PCDH9Q9HC56 1237 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms