RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 FMR1Q06787 632 aaKnown RBP eCLIP8.11□□□□□ -1.111e-6■■■■□ 23.3
CTNND1-231ENST00000532463 TLR1Q15399 786 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 BCL2A1Q16548 175 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 MTX3Q5HYI7 312 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 CYP4V2Q6ZWL3 525 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-231ENST00000532463 USP30Q70CQ3 517 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 AHSA2Q719I0 299 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 RD3Q7Z3Z2 195 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 ADGRG6Q86SQ4 1221 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 CHCHD4Q8N4Q1 142 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 OR6J1Q8NGC5 347 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 CREB3L1Q96BA8 519 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 CLIP3Q96DZ5 547 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 VCPIP1Q96JH7 1222 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 ZYG11BQ9C0D3 744 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 AAASQ9NRG9 546 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 ZNF226Q9NYT6 803 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 GNG8Q9UK08 70 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 PDPK1O15530 556 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 OIP5O43482 229 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 LATS1O95835 1130 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 GZMAP12544 262 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 IDO1P14902 403 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 SERPINA4P29622 427 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 ABL2P42684 1182 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 CDKN2CP42773 168 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 CSTF1Q05048 431 aaKnown RBP8.11□□□□□ -1.11
CTNND1-231ENST00000532463 ZNF844Q08AG5 666 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 FAAP100Q0VG06 881 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 MADCAM1Q13477 382 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 SLC9B1Q4ZJI4 515 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 CRTC2Q53ET0 693 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-231ENST00000532463 ZNF517Q6ZMY9 492 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-231ENST00000532463 C1orf186Q6ZWK4 172 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 TBC1D10CQ8IV04 446 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 SLC37A3Q8NCC5 494 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 TMEM143Q96AN5 459 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 FUZQ9BT04 418 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 CIPCQ9C0C6 399 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 B3GNT4Q9C0J1 378 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 ANKEF1Q9NU02 776 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.11□□□□□ -1.113e-6■□□□□ 9.8
CTNND1-231ENST00000532463 PDP1Q9P0J1 537 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-231ENST00000532463 HSPB11Q9Y547 144 aa8.11□□□□□ -1.11
CTNND1-231ENST00000532463 MYOM2P54296 1465 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 NRP2O60462 931 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 NDUFS2O75306 463 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 NPTXRO95502 500 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 CKMP06732 381 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 PLEKP08567 350 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-231ENST00000532463 UROSP10746 265 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 IL1R1P14778 569 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 USP4Q13107 963 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 RPA4Q13156 261 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 PARP6Q2NL67 630 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 ALG1LQ6GMV1 187 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 GLT6D1Q7Z4J2 308 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 TMEM192Q8IY95 271 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 METTL25Q8N6Q8 603 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 PHC3Q8NDX5 983 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 TBC1D15Q8TC07 691 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 HDAC7Q8WUI4 952 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 TATDN2Q93075 761 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 BORCS7Q96B45 105 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 PRICKLE1Q96MT3 831 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-231ENST00000532463 CDK5RAP1Q96SZ6 601 aaKnown RBP8.1□□□□□ -1.11
CTNND1-231ENST00000532463 COLEC11Q9BWP8 271 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 SYT4Q9H2B2 425 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 DBNDD1Q9H9R9 158 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 C14orf105Q9NVL8 296 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 SMPD3Q9NY59 655 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-231ENST00000532463 NINJ2Q9NZG7 142 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 NOP16Q9Y3C1 178 aaKnown RBP8.1□□□□□ -1.11
CTNND1-231ENST00000532463 EIF4G3O43432 1585 aaKnown RBP8.1□□□□□ -1.11
CTNND1-231ENST00000532463 IGSF9BQ9UPX0 1349 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 LCHNA4D1U4 455 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 TP73O15350 636 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 TXNP10599 105 aaKnown RBP8.1□□□□□ -1.11
CTNND1-231ENST00000532463 MGAT1P26572 445 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 VARSP26640 1264 aaKnown RBP8.1□□□□□ -1.11
CTNND1-231ENST00000532463 SLC1A2P43004 574 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 RAB4BP61018 213 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 RPL38P63173 70 aaKnown RBP8.1□□□□□ -1.11
CTNND1-231ENST00000532463 DDR1Q08345 913 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 TDGQ13569 410 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 PFKFB4Q16877 469 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 COL28A1Q2UY09 1125 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 PLA2G4EQ3MJ16 856 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 FBXO47Q5MNV8 452 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 HSDL2Q6YN16 418 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 ZNF627Q7L945 461 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 OR2T12Q8NG77 320 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 COQ8AQ8NI60 647 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 MALSU1Q96EH3 234 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 MARK4Q96L34 752 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 APBA2Q99767 749 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 COMMD3Q9UBI1 195 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 USP21Q9UK80 565 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 PLEKHA6Q9Y2H5 1048 aa8.1□□□□□ -1.11
CTNND1-231ENST00000532463 ZNF780BQ9Y6R6 833 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms