RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 RERGLQ9H628 205 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 ARMCX1Q9P291 453 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 DNAJB4Q9UDY4 337 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 PRMT5O14744 637 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-221ENST00000532331 FYNP06241 537 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 PRKAG1P54619 331 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 NAGLUP54802 743 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 ATP6V0D1P61421 351 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 ANGPT1Q15389 498 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 ITFG1Q8TB96 612 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 PIWIL2Q8TC59 973 aaKnown RBP11.28□□□□□ -0.6
PTPRK-221ENST00000532331 LCN9Q8WX39 176 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 ERVK-5Q9HDB9 667 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 PCDHB11Q9Y5F2 797 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 NEMP2A6NFY4 417 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 KIF1CO43896 1103 aaKnown RBP11.28□□□□□ -0.6
PTPRK-221ENST00000532331 ZCCHC18P0CG32 403 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 TFEBP19484 476 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 FGD3Q5JSP0 725 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 OTUD3Q5T2D3 398 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-221ENST00000532331 ATXN7L2Q5T6C5 722 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-221ENST00000532331 ZMAT2Q96NC0 199 aaKnown RBP11.28□□□□□ -0.6
PTPRK-221ENST00000532331 ROGDIQ9GZN7 287 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 SIRPGQ9P1W8 387 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 ATP6V1HQ9UI12 483 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 A0A1B0GW55 424 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 MATN3O15232 486 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 FAM20BO75063 409 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 DUX4L2P0CJ85 424 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 DUX4L3P0CJ86 424 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 DUX4L4P0CJ87 422 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 DUX4L5P0CJ88 424 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 DUX4L6P0CJ89 424 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 DUX4L7P0CJ90 424 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 ZNF280BQ86YH2 543 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 CYB5D2Q8WUJ1 264 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 MRPL57Q9BQC6 102 aaKnown RBP11.28□□□□□ -0.6
PTPRK-221ENST00000532331 DUX4Q9UBX2 424 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 FBXO5Q9UKT4 447 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 SCAMP1O15126 338 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 ERN1O75460 977 aaKnown RBP11.27□□□□□ -0.6
PTPRK-221ENST00000532331 CMPK1P30085 196 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 ARSIQ5FYB1 569 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 CERS6Q6ZMG9 384 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 MON1BQ7L1V2 547 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 FGD2Q7Z6J4 655 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 KRT73Q86Y46 540 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 CFAP206Q8IYR0 622 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 CKAP2Q8WWK9 683 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 P2RY13Q9BPV8 354 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 APOL4Q9BPW4 351 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 FBXL12Q9NXK8 326 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 SORCS3Q9UPU3 1222 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 SCML2Q9UQR0 700 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 SNX10Q9Y5X0 201 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 HEBP2Q9Y5Z4 205 aa11.27□□□□□ -0.6
PTPRK-221ENST00000532331 TK2O00142 265 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 LEFTY2O00292 366 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 SNUPNO95149 360 aaKnown RBP11.27□□□□□ -0.61
PTPRK-221ENST00000532331 ATP6V1G2O95670 118 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 CLPTM1O96005 669 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 HSMCR30P0CW71 290 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 RPS24P62847 133 aaKnown RBP11.27□□□□□ -0.61
PTPRK-221ENST00000532331 RFTN1Q14699 578 aaPredicted RBP11.27□□□□□ -0.61
PTPRK-221ENST00000532331 ENPP7Q6UWV6 458 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 CHSY3Q70JA7 882 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 SETD9Q8NE22 299 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 OR6Y1Q8NGX8 325 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 CLP1Q92989 425 aaKnown RBP11.27□□□□□ -0.61
PTPRK-221ENST00000532331 PSMG2Q969U7 264 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 CENPTQ96BT3 561 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 AIF1LQ9BQI0 150 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 SLC25A51Q9H1U9 297 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 RCCD1A6NED2 376 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 FAM58BPP0C7Q3 252 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 TYRP14679 529 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 EDNRBP24530 442 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 LRPAP1P30533 357 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 SLC34A1Q06495 639 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 AMZ1Q400G9 498 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 TYW3Q6IPR3 259 aaKnown RBP11.27□□□□□ -0.61
PTPRK-221ENST00000532331 CRYBG2Q8N1P7 616 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 GDPD5Q8WTR4 605 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 STYXQ8WUJ0 223 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 HAPLN3Q96S86 360 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 ABI3Q9P2A4 366 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 DLG5Q8TDM6 1919 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 OR2AG2A6NM03 316 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 ENO4A6NNW6 628 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 CNMDO75829 334 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 RPL3P39023 403 aaKnown RBP11.27□□□□□ -0.61
PTPRK-221ENST00000532331 DUPD1Q68J44 220 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 BHLHB9Q6PI77 547 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 RNF148Q8N7C7 305 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 RDH11Q8TC12 318 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 NUS1Q96E22 293 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 MTERF3Q96E29 417 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 LMLNQ96KR4 655 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 GDAP2Q9NXN4 497 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 CD207Q9UJ71 328 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms