RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ACVR1Q04771 509 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 POU6F1Q14863 301 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 ANGPT1Q15389 498 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 TRADDQ15628 312 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 SKIDA1Q1XH10 827 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 CERCAMQ5T4B2 595 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 KIAA0895LQ68EN5 471 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 LYSMD3Q7Z3D4 306 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 TRIM46Q7Z4K8 759 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 TECPR1Q7Z6L1 1165 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 TSPAN33Q86UF1 283 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 LINC00528Q8N1L1 170 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 DENND6BQ8NEG7 585 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 GAB3Q8WWW8 586 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 SGSM3Q96HU1 749 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 PLEKHG4BQ96PX9 1271 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 FMO2Q99518 471 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 CD93Q9NPY3 652 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 SAMD15Q9P1V8 674 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 ZFR2Q9UPR6 939 aaKnown RBP12.49□□□□□ -0.41
COPB1-208ENST00000532088 DMTF1Q9Y222 760 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 ITM2BQ9Y287 266 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 PKP3Q9Y446 797 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 TBC1D3DA0A087WVF3 549 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TBC1D3IA0A087WXS9 549 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TBC1D3EA0A087X179 549 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TBC1D3KA0A087X1G2 549 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TBC1D3FA6NER0 549 aaPredicted RBP12.48□□□□□ -0.41
COPB1-208ENST00000532088 TBC1D3LB9A6J9 549 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 WNT9AO14904 365 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 STX7O15400 261 aaKnown RBP12.48□□□□□ -0.41
COPB1-208ENST00000532088 LILRB5O75023 590 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 NDUFS2O75306 463 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 AVILO75366 819 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 USP1O94782 785 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 PCDH8O95206 1070 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 CLDN7O95471 211 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 PYGLP06737 847 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 GSTA2P09210 222 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 C1SP09871 688 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TBC1D3HP0C7X1 549 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TSHRP16473 764 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TPH1P17752 444 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TEAD1P28347 426 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 PXNP49023 591 aaPredicted RBP12.48□□□□□ -0.41
COPB1-208ENST00000532088 ATP1A2P50993 1020 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 DPTQ07507 201 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 DMWDQ09019 674 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 FRG1Q14331 258 aaKnown RBP12.48□□□□□ -0.41
COPB1-208ENST00000532088 HLTFQ14527 1009 aaKnown RBP eCLIP12.48□□□□□ -0.41
COPB1-208ENST00000532088 ZNF284Q2VY69 593 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 CCDC38Q502W7 563 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 LRRC73Q5JTD7 316 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 FNBP1LQ5T0N5 605 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TSTD2Q5T7W7 516 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 PDPK2PQ6A1A2 396 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TBC1D3GQ6DHY5 549 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TBC1D3CQ6IPX1 549 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TSSK4Q6SA08 328 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TMEM135Q86UB9 458 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 FAM124AQ86V42 546 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TBC1D3Q8IZP1 549 aaPredicted RBP12.48□□□□□ -0.41
COPB1-208ENST00000532088 IFT81Q8WYA0 676 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 EID2BQ96D98 161 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 STAMBPL1Q96FJ0 436 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 DTD2Q96FN9 168 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 EBNA1BP2Q99848 306 aaKnown RBP12.48□□□□□ -0.41
COPB1-208ENST00000532088 DUSP15Q9H1R2 295 aaPredicted RBP12.48□□□□□ -0.41
COPB1-208ENST00000532088 KCNH6Q9H252 994 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TREX1Q9NSU2 369 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 NLE1Q9NVX2 485 aaPredicted RBP12.48□□□□□ -0.41
COPB1-208ENST00000532088 SYBUQ9NX95 663 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 MBD1Q9UIS9 605 aaPredicted RBP12.48□□□□□ -0.41
COPB1-208ENST00000532088 GGT7Q9UJ14 662 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 RAB21Q9UL25 225 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 TEX264Q9Y6I9 313 aa12.48□□□□□ -0.41
COPB1-208ENST00000532088 CACNA1IQ9P0X4 2223 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 ZDBF2Q9HCK1 2354 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 A0A1W2PQU0 124 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 METTL12A8MUP2 240 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 TOR1BO14657 336 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 AURKAO14965 403 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 MMP20O60882 483 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 RPP40O75818 363 aaKnown RBP12.47□□□□□ -0.41
COPB1-208ENST00000532088 PIRTP0C851 137 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 GM2AP17900 193 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 PGAM1P18669 254 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 PAMP19021 973 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 PDIA2Q13087 525 aaKnown RBP12.47□□□□□ -0.41
COPB1-208ENST00000532088 SGCGQ13326 291 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 SLMAPQ14BN4 828 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 ERCC6LQ2NKX8 1250 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 SETMARQ53H47 684 aaPredicted RBP12.47□□□□□ -0.41
COPB1-208ENST00000532088 CCNI2Q6ZMN8 369 aaPredicted RBP12.47□□□□□ -0.41
COPB1-208ENST00000532088 HSD11B1LQ7Z5J1 315 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 RLN3Q8WXF3 142 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 ZC3H10Q96K80 434 aaKnown RBP12.47□□□□□ -0.41
COPB1-208ENST00000532088 SMIM14Q96QK8 99 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 LRFN3Q9BTN0 628 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 GPR174Q9BXC1 333 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms