RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 PRMT2P55345 433 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 RPP38P78345 283 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 AANATQ16613 207 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 P3H1Q32P28 736 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 C10orf120Q5SQS8 335 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 AKNAD1Q5T1N1 836 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 BRAT1Q6PJG6 821 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 BIVMQ86UB2 503 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 SLC15A3Q8IY34 581 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 TOP6BLQ8N6T0 577 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 RASGEF1AQ8N9B8 481 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 ZNF565Q8N9K5 539 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 LEMD2Q8NC56 503 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 TMEM52Q8NDY8 209 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 TSPAN14Q8NG11 270 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 OR52J3Q8NH60 311 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 CASKIN2Q8WXE0 1202 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 GTF3C6Q969F1 213 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 QRFPRQ96P65 431 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 FCRL4Q96PJ5 515 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 NUAK2Q9H093 628 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 FARSBQ9NSD9 589 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 PNPLA3Q9NST1 481 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 THEGQ9P2T0 379 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 PEMTQ9UBM1 199 aa5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 ZNF644Q9H582 1327 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-222ENST00000531967 A0A1B0GTQ1 180 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 MBD3L5A6NJ08 208 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 SPECC1L-ADORA2AF8WAN1 911 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 WNT10BO00744 389 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 CAPN5O15484 640 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 RRP8O43159 456 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 LRRTM2O43300 516 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 PLRG1O43660 514 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 BAG4O95429 457 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 CXCL14O95715 111 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 CSTAP01040 98 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 IL1BP01584 269 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 FHP07954 510 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 OR52Z1P0C646 297 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 CYP2F1P24903 491 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 MGAT1P26572 445 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 THBS2P35442 1172 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 KIR3DL1P43629 444 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 CDKN1BP46527 198 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 RPS6KA3P51812 740 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 GALCP54803 685 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 MTTPP55157 894 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 MYL6P60660 151 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 TPM4P67936 248 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 FHL3Q13643 280 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 BCL7AQ4VC05 210 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 RUNDC3AQ59EK9 446 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 ARHGEF16Q5VV41 709 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 KRT39Q6A163 491 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 MRPL14Q6P1L8 145 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 DEGS2Q6QHC5 323 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 CFAP77Q6ZQR2 320 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 MRPL10Q7Z7H8 261 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 RASAL3Q86YV0 1011 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 TRIM48Q8IWZ4 208 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 RNF10Q8N5U6 811 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 SETD9Q8NE22 299 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 SLC22A8Q8TCC7 542 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 CNOT9Q92600 299 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 APBB2Q92870 758 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 HPS1Q92902 700 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 SGK3Q96BR1 496 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 TRIB1Q96RU8 372 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 SMC6Q96SB8 1091 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 MDFIQ99750 246 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 ASCL2Q99929 193 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 C19orf43Q9BQ61 176 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 S1PR5Q9H228 398 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 PSTPIP2Q9H939 334 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 RNPEPL1Q9HAU8 725 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 GPR35Q9HC97 309 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 JPH1Q9HDC5 661 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 SDHAF3Q9NRP4 125 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 NCKIPSDQ9NZQ3 722 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 FBLN5Q9UBX5 448 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 USP22Q9UPT9 525 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 PRELID1Q9Y255 219 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 ABCA10Q8WWZ4 1543 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 SSU72P8A0A1W2PR75 194 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 A0A1W2PRG0 241 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 LGALS8O00214 317 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 HS3ST1O14792 307 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 DYNC1LI2O43237 492 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 EXTL3O43909 919 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 BCL10O95999 233 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 CHRM2P08172 466 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 SRFP11831 508 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 MMP9P14780 707 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 PTGS1P23219 599 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 CSF2RBP32927 897 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 CSTF2P33240 577 aaKnown RBP eCLIP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 CDKN1AP38936 164 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 SUOXP51687 545 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 ZNF135P52742 658 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms