RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 VAT1Q99536 393 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 LGR4Q9BXB1 951 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 GPR63Q9BZJ6 419 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 FAM83DQ9H4H8 585 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 STN1Q9H668 368 aaKnown RBP12.53□□□□□ -0.4
C11orf54-210ENST00000531516 MRPL40Q9NQ50 206 aaKnown RBP12.53□□□□□ -0.4
C11orf54-210ENST00000531516 PNMA8BQ9ULN7 279 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-210ENST00000531516 SUFUQ9UMX1 484 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 EPN1Q9Y6I3 576 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-210ENST00000531516 AKAP13Q12802 2813 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 KMT2BQ9UMN6 2715 aaPredicted RBP12.52□□□□□ -0.41
C11orf54-210ENST00000531516 C3orf70A6NLC5 250 aaPredicted RBP12.52□□□□□ -0.41
C11orf54-210ENST00000531516 HACD1B0YJ81 288 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 NUDT21O43809 227 aaKnown RBP12.52□□□□□ -0.41
C11orf54-210ENST00000531516 NDUFA10O95299 355 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 CLDN7O95471 211 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 MPOP05164 745 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 RPLP0P05388 317 aaKnown RBP12.52□□□□□ -0.41
C11orf54-210ENST00000531516 CEACAM5P06731 702 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 SLC2A4P14672 509 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 GM2AP17900 193 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 CDKN2BP42772 138 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 COPS2P61201 443 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 SKOR1P84550 965 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 CDK18Q07002 472 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 NIPAL4Q0D2K0 466 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 TEX44Q53QW1 395 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 C3orf38Q5JPI3 329 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 PERM1Q5SV97 790 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 FOXR1Q6PIV2 292 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 OGFOD3Q6PK18 319 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 SPOCD1Q6ZMY3 1216 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 KIAA1328Q86T90 577 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 CCNJLQ8IV13 435 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 GPR156Q8NFN8 814 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 SNIP1Q8TAD8 396 aaKnown RBP12.52□□□□□ -0.41
C11orf54-210ENST00000531516 GPBAR1Q8TDU6 330 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 ZDHHC1Q8WTX9 485 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 HAUS1Q96CS2 278 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 IMP4Q96G21 291 aaKnown RBP12.52□□□□□ -0.41
C11orf54-210ENST00000531516 OLFM3Q96PB7 478 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 OR2M4Q96R27 311 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 RIOK2Q9BVS4 552 aaKnown RBP12.52□□□□□ -0.41
C11orf54-210ENST00000531516 FRMD8Q9BZ67 464 aaPredicted RBP12.52□□□□□ -0.41
C11orf54-210ENST00000531516 ZMYND15Q9H091 742 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 ABCG8Q9H221 673 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 CAAP1Q9H8G2 361 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 RMI1Q9H9A7 625 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 ZFYVE1Q9HBF4 777 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 KLHL8Q9P2G9 620 aaPredicted RBP12.52□□□□□ -0.41
C11orf54-210ENST00000531516 LRIT1Q9P2V4 623 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 SLC17A4Q9Y2C5 497 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 HYOU1Q9Y4L1 999 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 PCDHB1Q9Y5F3 818 aa12.52□□□□□ -0.41
C11orf54-210ENST00000531516 CCDC187A0A096LP49 1063 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 CCDC66A2RUB6 948 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 EIF4E1BA6NMX2 242 aaKnown RBP12.51□□□□□ -0.41
C11orf54-210ENST00000531516 DXOO77932 396 aaKnown RBP12.51□□□□□ -0.41
C11orf54-210ENST00000531516 EIF2S3P41091 472 aaKnown RBP12.51□□□□□ -0.41
C11orf54-210ENST00000531516 ACTR1BP42025 376 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 SPINT3P49223 89 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 UCNP55089 124 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 ACTR1AP61163 376 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 ZBTB17Q13105 803 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 PPP2R5EQ16537 467 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 PCSK7Q16549 785 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 QPCTQ16769 361 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 CERCAMQ5T4B2 595 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 ZDHHC20Q5W0Z9 365 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 SLC30A9Q6PML9 568 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 NPNTQ6UXI9 565 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 SYCE1Q8N0S2 351 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 Q8N9G6 341 aaPredicted RBP12.51□□□□□ -0.41
C11orf54-210ENST00000531516 AVL9Q8NBF6 648 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 LRRN4Q8WUT4 740 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 SCAMP4Q969E2 229 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 TMEM159Q96B96 161 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 ATXN7L3BQ96GX2 97 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 LRRN3Q9H3W5 708 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 GLOD4Q9HC38 313 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 MAGEE1Q9HCI5 957 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 EPB41L5Q9HCM4 733 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.51□□□□□ -0.41
C11orf54-210ENST00000531516 TAAR2Q9P1P5 351 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 VPS18Q9P253 973 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 FAM153AQ9UHL3 310 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 ZNHIT2Q9UHR6 403 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 APPL1Q9UKG1 709 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 TRHDEQ9UKU6 1024 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 PCDHGA8Q9Y5G5 932 aa12.51□□□□□ -0.41
C11orf54-210ENST00000531516 MACROD2A1Z1Q3 448 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 GOLGA6L9A6NEM1 432 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 GPR89AB7ZAQ6 455 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 H7C0C1 242 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 INPP4BO15327 924 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 NDST3O95803 873 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 PRLP01236 227 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 SLC4A1P02730 911 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 JMJD7P0C870 316 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 GPR89BP0CG08 455 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms