RNA–Protein interactions for RNA: ENST00000530983.5

VPS28-213, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-213ENST00000530983 C9JVG2 144 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 H3BMM5 538 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 FXYD1O00168 92 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 TNPO2O14787 897 aaKnown RBP19.23■□□□□ 0.67
VPS28-213ENST00000530983 AZIN1O14977 448 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 ETFBP38117 255 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 ALDH3B2P48448 385 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 EMP3P54852 163 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 TBX4P57082 545 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 GNASQ5JWF2 1037 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 KANK2Q63ZY3 851 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 KRT80Q6KB66 452 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 MSANTD2Q6P1R3 559 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 MON1AQ86VX9 555 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 TRIML2Q8N7C3 387 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 GAB3Q8WWW8 586 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 IGSF8Q969P0 613 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 ZUFSPQ96AP4 578 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 TMIGD2Q96BF3 282 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 KCNA7Q96RP8 456 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 CCM2LQ9NUG4 571 aaPredicted RBP19.23■□□□□ 0.67
VPS28-213ENST00000530983 ABI2Q9NYB9 513 aaPredicted RBP19.23■□□□□ 0.67
VPS28-213ENST00000530983 SCML2Q9UQR0 700 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 ZNF510Q9Y2H8 683 aa19.23■□□□□ 0.67
VPS28-213ENST00000530983 ANKRD36A6QL64 1941 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 STAMBPO95630 424 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 GLP2RO95838 553 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 TYMPP19971 482 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 GPR15P49685 360 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 SUOXP51687 545 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 PFKFB4Q16877 469 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 GEN1Q17RS7 908 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 SLC15A3Q8IY34 581 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 MIER2Q8N344 545 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 RMND5BQ96G75 393 aaPredicted RBP19.22■□□□□ 0.67
VPS28-213ENST00000530983 ASB2Q96Q27 587 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 HOPXQ9BPY8 73 aaPredicted RBP19.22■□□□□ 0.67
VPS28-213ENST00000530983 MTG1Q9BT17 334 aaPredicted RBP19.22■□□□□ 0.67
VPS28-213ENST00000530983 NDUFAF1Q9Y375 327 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 IGLV3-10A0A075B6K4 115 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 CD3EAPO15446 510 aaKnown RBP19.22■□□□□ 0.67
VPS28-213ENST00000530983 IGHA2P01877 340 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 ATP6V0D1P61421 351 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 FIBCD1Q8N539 461 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 MINDY1Q8N5J2 469 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 C2orf69Q8N8R5 385 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 BLOC1S5Q8TDH9 187 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 TFAP2CQ92754 450 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 ATOH8Q96SQ7 321 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 TCF12Q99081 682 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.22■□□□□ 0.67
VPS28-213ENST00000530983 THEGQ9P2T0 379 aa19.22■□□□□ 0.67
VPS28-213ENST00000530983 A0A1B0GTL3 188 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 CCDC162PA2VCL2 907 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 DLGAP1O14490 977 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 TRMUO75648 421 aaKnown RBP19.21■□□□□ 0.67
VPS28-213ENST00000530983 CHRM3P20309 590 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 CAPRIN1Q14444 709 aaKnown RBP19.21■□□□□ 0.67
VPS28-213ENST00000530983 DSC3Q14574 896 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 DDR2Q16832 855 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 SPPL2CQ8IUH8 684 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 EPHX4Q8IUS5 362 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 DDIASQ8IXT1 998 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 OR13C4Q8NGS5 318 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 GPR150Q8NGU9 434 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 RHEBL1Q8TAI7 183 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 MIPOL1Q8TD10 442 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 UROC1Q96N76 676 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 TIMMDC1Q9NPL8 285 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 EGFL7Q9UHF1 273 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 CROCCQ5TZA2 2017 aa19.21■□□□□ 0.67
VPS28-213ENST00000530983 SAC3D1A6NKF1 404 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 HSD17B1P14061 328 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 AKR1A1P14550 325 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 UGT1A6P19224 532 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 ADARP55265 1226 aaKnown RBP19.2■□□□□ 0.66
VPS28-213ENST00000530983 TBCELQ5QJ74 424 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 ACBD5Q5T8D3 534 aaPredicted RBP19.2■□□□□ 0.66
VPS28-213ENST00000530983 FBXL22Q6P050 247 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 FAM47BQ8NA70 645 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 GBF1Q92538 1859 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 SEMA3CQ99985 751 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 SDR39U1Q9NRG7 319 aaPredicted RBP19.2■□□□□ 0.66
VPS28-213ENST00000530983 CMTM6Q9NX76 183 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 POLG2Q9UHN1 485 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 AURKCQ9UQB9 309 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 AQP12BA6NM10 295 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 ANGPT2O15123 496 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 MUSKO15146 869 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 B4GALT3O60512 393 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 MATN4O95460 622 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 SLC6A2P23975 617 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 THPOP40225 353 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 GALK1P51570 392 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 EFEMP1Q12805 493 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 MRNIPQ6NTE8 343 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 PRMT9Q6P2P2 845 aa19.2■□□□□ 0.66
VPS28-213ENST00000530983 RAB44Q7Z6P3 723 aaPredicted RBP19.2■□□□□ 0.66
VPS28-213ENST00000530983 CIR1Q86X95 450 aaPredicted RBP19.2■□□□□ 0.66
VPS28-213ENST00000530983 AQP12AQ8IXF9 295 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms