RNA–Protein interactions for RNA: ENST00000528873.2

GEN1-204, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 5

Gene GEN1, Length 871 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-204ENST00000528873 FGF5P12034 268 aa3.95□□□□□ -1.78
GEN1-204ENST00000528873 HSD3B1P14060 373 aa3.95□□□□□ -1.78
GEN1-204ENST00000528873 CNTFP26441 200 aa3.95□□□□□ -1.78
GEN1-204ENST00000528873 RGS19P49795 217 aa3.95□□□□□ -1.78
GEN1-204ENST00000528873 ATP12AP54707 1039 aa3.95□□□□□ -1.78
GEN1-204ENST00000528873 EEF1A1P68104 462 aaKnown RBP3.95□□□□□ -1.78
GEN1-204ENST00000528873 SREBF2Q12772 1141 aa3.95□□□□□ -1.78
GEN1-204ENST00000528873 EEF1A1P5Q5VTE0 462 aa3.95□□□□□ -1.78
GEN1-204ENST00000528873 HIST2H2BCQ6DN03 193 aa3.95□□□□□ -1.78
GEN1-204ENST00000528873 HIST2H2BDQ6DRA6 164 aa3.95□□□□□ -1.78
GEN1-204ENST00000528873 ASB18Q6ZVZ8 466 aa3.95□□□□□ -1.78
GEN1-204ENST00000528873 PABPC5Q96DU9 382 aaKnown RBP3.95□□□□□ -1.78
GEN1-204ENST00000528873 SLC41A2Q96JW4 573 aa3.95□□□□□ -1.78
GEN1-204ENST00000528873 GLIS2Q9BZE0 524 aaPredicted RBP3.95□□□□□ -1.78
GEN1-204ENST00000528873 OR2W1Q9Y3N9 320 aa3.95□□□□□ -1.78
GEN1-204ENST00000528873 CEPT1Q9Y6K0 416 aa3.95□□□□□ -1.78
GEN1-204ENST00000528873 SCINQ9Y6U3 715 aa3.95□□□□□ -1.78
GEN1-204ENST00000528873 USP17L23D6RBM5 183 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 WDR1O75083 606 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 ERVK11-1P61568 191 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 CSNK2A1P68400 391 aaPredicted RBP3.94□□□□□ -1.78
GEN1-204ENST00000528873 TLE2Q04725 743 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 GPR68Q15743 365 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 STXBP5Q5T5C0 1151 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 SIGIRRQ6IA17 410 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 QSOX2Q6ZRP7 698 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 WDSUB1Q8N9V3 476 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 CSNK2A3Q8NEV1 391 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 PIGTQ969N2 578 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 GCC1Q96CN9 775 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 ORAI1Q96D31 301 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 HVCN1Q96D96 273 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 PCYT2Q99447 389 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 POLR3CQ9BUI4 534 aaPredicted RBP3.94□□□□□ -1.78
GEN1-204ENST00000528873 CHMP4AQ9BY43 222 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 IFIH1Q9BYX4 1025 aaKnown RBP3.94□□□□□ -1.78
GEN1-204ENST00000528873 ZNF696Q9H7X3 374 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 VEZTQ9HBM0 779 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 DDX43Q9NXZ2 648 aaKnown RBP3.94□□□□□ -1.78
GEN1-204ENST00000528873 MPP6Q9NZW5 540 aa3.94□□□□□ -1.78
GEN1-204ENST00000528873 ARID4BQ4LE39 1312 aaPredicted RBP3.94□□□□□ -1.78
GEN1-204ENST00000528873 TTC36A6NLP5 189 aa3.93□□□□□ -1.78
GEN1-204ENST00000528873 IFRD1O00458 451 aaPredicted RBP3.93□□□□□ -1.78
GEN1-204ENST00000528873 EDIL3O43854 480 aa3.93□□□□□ -1.78
GEN1-204ENST00000528873 FTCDO95954 541 aa3.93□□□□□ -1.78
GEN1-204ENST00000528873 LDLRP01130 860 aa3.93□□□□□ -1.78
GEN1-204ENST00000528873 POLBP06746 335 aa3.93□□□□□ -1.78
GEN1-204ENST00000528873 HOXA1P49639 335 aaPredicted RBP3.93□□□□□ -1.78
GEN1-204ENST00000528873 VEGFCP49767 419 aa3.93□□□□□ -1.78
GEN1-204ENST00000528873 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
GEN1-204ENST00000528873 FOXM1Q08050 763 aa3.93□□□□□ -1.78
GEN1-204ENST00000528873 TRPC3Q13507 836 aa3.93□□□□□ -1.78
GEN1-204ENST00000528873 TTI2Q6NXR4 508 aa3.93□□□□□ -1.78
GEN1-204ENST00000528873 CYP26C1Q6V0L0 522 aa3.93□□□□□ -1.78
GEN1-204ENST00000528873 SLC46A3Q7Z3Q1 461 aa3.93□□□□□ -1.78
GEN1-204ENST00000528873 PCDH20Q8N6Y1 951 aaKnown RBP3.93□□□□□ -1.78
GEN1-204ENST00000528873 KLHL29Q96CT2 875 aa3.93□□□□□ -1.78
GEN1-204ENST00000528873 ZNF501Q96CX3 271 aaPredicted RBP3.93□□□□□ -1.78
GEN1-204ENST00000528873 UBXN10Q96LJ8 280 aa3.93□□□□□ -1.78
GEN1-204ENST00000528873 LRRC53A6NM62 1247 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 PMS2P5A8MQ11 134 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 SEC31AO94979 1220 aaKnown RBP3.92□□□□□ -1.78
GEN1-204ENST00000528873 EGFP01133 1207 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 HNRNPA1P09651 372 aaKnown RBP eCLIP3.92□□□□□ -1.78
GEN1-204ENST00000528873 PAFAH1B1P43034 410 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 VAMP2P63027 116 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 GALNT2Q10471 571 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 GSTA3Q16772 222 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 COL28A1Q2UY09 1125 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 TMEM35AQ53FP2 167 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 PQLC2Q6ZP29 291 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 HMGCLL1Q8TB92 370 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 SCLT1Q96NL6 688 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 QRFPRQ96P65 431 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 F2RL3Q96RI0 385 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 KCND2Q9NZV8 630 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 TBX20Q9UMR3 447 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 DLGAP4Q9Y2H0 992 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 AAR2Q9Y312 384 aaKnown RBP3.92□□□□□ -1.78
GEN1-204ENST00000528873 PTPRCP08575 1304 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 NOTCH3Q9UM47 2321 aa3.92□□□□□ -1.78
GEN1-204ENST00000528873 SMCHD1A6NHR9 2005 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 SNAP23O00161 211 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 ZNHIT1O43257 154 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 SPINT2O43291 252 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 HOXB5P09067 269 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 PAX1P15863 534 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 CDAP32320 146 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 AMPHP49418 695 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 MMP14P50281 582 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 NEXNQ0ZGT2 675 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 GRIK2Q13002 908 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 ZNF234Q14588 700 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 DRAP1Q14919 205 aaPredicted RBP3.91□□□□□ -1.78
GEN1-204ENST00000528873 BAK1Q16611 211 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 USP41Q3LFD5 358 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 C14orf177Q52M58 125 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 SIRPB2Q5JXA9 342 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 FAM171BQ6P995 826 aa3.91□□□□□ -1.78
GEN1-204ENST00000528873 BRAT1Q6PJG6 821 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms