RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 TEX11Q8IYF3 940 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 CNTROBQ8N137 903 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 IQCF1Q8N6M8 205 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 NEXN-AS1Q8NBZ9 246 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 RFFLQ8WZ73 363 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 ERGIC1Q969X5 290 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 GLIS2Q9BZE0 524 aaPredicted RBP5.94□□□□□ -1.46
PCF11-202ENST00000528336 ABCF3Q9NUQ8 709 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 AASSQ9UDR5 926 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 A4GNTQ9UNA3 340 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 LSM4Q9Y4Z0 139 aaKnown RBP5.94□□□□□ -1.46
PCF11-202ENST00000528336 SHANK2Q9UPX8 1470 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 HECW2Q9P2P5 1572 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 INO80Q9ULG1 1556 aaPredicted RBP5.93□□□□□ -1.46
PCF11-202ENST00000528336 DAPK1P53355 1430 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 YEATS2Q9ULM3 1422 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 IGKV2D-30A0A075B6S6 120 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 PGPEP1LA6NFU8 196 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 TSPY2A6NKD2 308 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 TNFSF14O43557 240 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 SEC31AO94979 1220 aaKnown RBP5.93□□□□□ -1.46
PCF11-202ENST00000528336 VNN2O95498 520 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 MT-CYBP00156 380 aaPredicted RBP5.93□□□□□ -1.46
PCF11-202ENST00000528336 GLUD1P00367 558 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 TSPY3P0CV98 308 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 TSPY4P0CV99 314 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 TSPY8P0CW00 308 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 TSPY10P0CW01 314 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 T-ENOLP0DO92 83 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 IRF1P10914 325 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 ETFAP13804 333 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 ATP6V1B1P15313 513 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 ITGB8P26012 769 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 EPHA8P29322 1005 aaPredicted RBP5.93□□□□□ -1.46
PCF11-202ENST00000528336 C21orf33P30042 268 aaPredicted RBP5.93□□□□□ -1.46
PCF11-202ENST00000528336 GLUD2P49448 558 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 MXI1P50539 228 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 TSPY1Q01534 308 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 CFAP58Q5T655 872 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 ATF7IPQ6VMQ6 1270 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 SLC46A3Q7Z3Q1 461 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 GALNT13Q8IUC8 556 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 CEP57L1Q8IYX8 460 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 CCDC191Q8NCU4 936 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 KCNG4Q8TDN1 519 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 ADAMTS15Q8TE58 950 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 CENPTQ96BT3 561 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 SAAL1Q96ER3 474 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 MARK4Q96L34 752 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 C7orf26Q96N11 449 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 ZNF570Q96NI8 536 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 IWS1Q96ST2 819 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 SDF4Q9BRK5 362 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 H2AFJQ9BTM1 129 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 BPIFA1Q9NP55 256 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 PDRG1Q9NUG6 133 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 IRAK4Q9NWZ3 460 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 CISD1Q9NZ45 108 aaKnown RBP5.93□□□□□ -1.46
PCF11-202ENST00000528336 ORC3Q9UBD5 711 aaPredicted RBP5.93□□□□□ -1.46
PCF11-202ENST00000528336 ATP7AQ04656 1500 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 MAST1Q9Y2H9 1570 aa5.93□□□□□ -1.46
PCF11-202ENST00000528336 DNMT1P26358 1616 aaKnown RBP5.92□□□□□ -1.46
PCF11-202ENST00000528336 C9orf84Q5VXU9 1444 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 ATP10AO60312 1499 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 A0A1W2PPH5 198 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 LINC01553A4QN01 128 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 NPIPB11E5RHQ5 1161 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 PI4K2BG5E9Z4 385 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 TFP02787 698 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 UBL4AP11441 157 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 ALOX12P18054 663 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 LTBQ06643 244 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 CDC16Q13042 620 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 TXNDC8Q6A555 127 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 SHFQ7M4L6 423 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 CATSPER4Q7RTX7 472 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 VSIG1Q86XK7 387 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 CARNMT1Q8N4J0 409 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 MSANTD4Q8NCY6 345 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 CADM4Q8NFZ8 388 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 ELP5Q8TE02 316 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 TMED6Q8WW62 240 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 SNAPC3Q92966 411 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 FBXL8Q96CD0 374 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 PABPC5Q96DU9 382 aaKnown RBP5.92□□□□□ -1.46
PCF11-202ENST00000528336 SLC25A33Q9BSK2 321 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 TXLNGYQ9BZA5 131 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 PDCL3Q9H2J4 239 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 GHITMQ9H3K2 345 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 MAGEE1Q9HCI5 957 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 NFE2L3Q9Y4A8 694 aa5.92□□□□□ -1.46
PCF11-202ENST00000528336 TRIP12Q14669 1992 aaPredicted RBP5.92□□□□□ -1.46
PCF11-202ENST00000528336 A0A1W2PQM1 296 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 KCNJ13O60928 360 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 SERPINI2O75830 405 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 ITGAXP20702 1163 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 CCKARP32238 428 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 CPOXP36551 454 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 EGR4Q05215 589 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 PTPN14Q15678 1187 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms