RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 MRPL46Q9H2W6 279 aaKnown RBP13.03□□□□□ -0.32
RBM39-243ENST00000528062 NSUN3Q9H649 340 aaKnown RBP13.03□□□□□ -0.32
RBM39-243ENST00000528062 COQ10BQ9H8M1 238 aa13.03□□□□□ -0.32
RBM39-243ENST00000528062 GTSE1Q9NYZ3 720 aa13.03□□□□□ -0.32
RBM39-243ENST00000528062 DMTF1Q9Y222 760 aa13.03□□□□□ -0.32
RBM39-243ENST00000528062 H3BSA7 217 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 NPHS1O60500 1241 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 C8BP07358 591 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 NELFEP18615 380 aaKnown RBP13.02□□□□□ -0.32
RBM39-243ENST00000528062 GRIK1P39086 918 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 SH3BGRP55822 239 aaPredicted RBP13.02□□□□□ -0.32
RBM39-243ENST00000528062 LRP8Q14114 963 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 TBC1D25Q3MII6 688 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 PCID2Q5JVF3 399 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 CHSY3Q70JA7 882 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 IPMKQ8NFU5 416 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 CEP70Q8NHQ1 597 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 EME1Q96AY2 570 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 PGAP3Q96FM1 320 aaPredicted RBP13.02□□□□□ -0.32
RBM39-243ENST00000528062 C8orf48Q96LL4 319 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 TBL1YQ9BQ87 522 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 CYP4F12Q9HCS2 524 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 TRPC7Q9HCX4 862 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 IGSF5Q9NSI5 407 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 CACNA2D2Q9NY47 1150 aa13.02□□□□□ -0.32
RBM39-243ENST00000528062 PRORSD1PA6NEY8 169 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 TRIM24O15164 1050 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 C8AP07357 584 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 PSMD8P48556 350 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 HSPA13P48723 471 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 PGFP49763 221 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 TWF1Q12792 350 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
RBM39-243ENST00000528062 TRIM25Q14258 630 aaKnown RBP13.02□□□□□ -0.33
RBM39-243ENST00000528062 RBM20Q5T481 1227 aaKnown RBP13.02□□□□□ -0.33
RBM39-243ENST00000528062 GIPC2Q8TF65 315 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 ELMO2Q96JJ3 720 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 SLC29A1Q99808 456 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 FICDQ9BVA6 458 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 WDCPQ9H6R7 721 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 UTP6Q9NYH9 597 aaKnown RBP13.02□□□□□ -0.33
RBM39-243ENST00000528062 NCKIPSDQ9NZQ3 722 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 LMCD1Q9NZU5 365 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 GMPR2Q9P2T1 348 aaKnown RBP13.02□□□□□ -0.33
RBM39-243ENST00000528062 SUCOQ9UBS9 1254 aaKnown RBP13.02□□□□□ -0.33
RBM39-243ENST00000528062 CNOT11Q9UKZ1 510 aaKnown RBP13.02□□□□□ -0.33
RBM39-243ENST00000528062 TMCO1Q9UM00 188 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 NEU3Q9UQ49 428 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 AP4S1Q9Y587 144 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 CEPT1Q9Y6K0 416 aa13.02□□□□□ -0.33
RBM39-243ENST00000528062 TRPC5OSA6NMA1 111 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 HNRNPRO43390 633 aaKnown RBP13.01□□□□□ -0.33
RBM39-243ENST00000528062 ZNF189O75820 626 aaPredicted RBP13.01□□□□□ -0.33
RBM39-243ENST00000528062 HMGA1P17096 107 aaKnown RBP13.01□□□□□ -0.33
RBM39-243ENST00000528062 RANBP1P43487 201 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 CHRNA4P43681 627 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 CXCR3P49682 368 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 SLC5A3P53794 718 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 PRPSAP1Q14558 356 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 CYTH1Q15438 398 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 ARL13BQ3SXY8 428 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 ZNF789Q5FWF6 425 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 REP15Q6BDI9 236 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 PIWIL4Q7Z3Z4 852 aaKnown RBP13.01□□□□□ -0.33
RBM39-243ENST00000528062 LINC00523Q86TU6 105 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 FAM110BQ8TC76 370 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 LPGAT1Q92604 370 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 ZNF597Q96LX8 424 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 PREBQ9HCU5 417 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 EPS15L1Q9UBC2 864 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 DFFAO00273 331 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 PRRG1O14668 218 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 TMCC1O94876 653 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 C1RP00736 705 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 PSMC3P17980 439 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 CDH2P19022 906 aaPredicted RBP13.01□□□□□ -0.33
RBM39-243ENST00000528062 CLCN2P51788 898 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 NR1H2P55055 460 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 UGP2Q16851 508 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 MTX3Q5HYI7 312 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 ZNF470Q6ECI4 717 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 PM20D1Q6GTS8 502 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 GPR153Q6NV75 609 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 KDELC2Q7Z4H8 507 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 TAC4Q86UU9 113 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 MYLIPQ8WY64 445 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 TMIGD2Q96BF3 282 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 SPATA17Q96L03 361 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 TSGA13Q96PP4 275 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 CDX2Q99626 313 aaPredicted RBP13.01□□□□□ -0.33
RBM39-243ENST00000528062 MRPL57Q9BQC6 102 aaKnown RBP13.01□□□□□ -0.33
RBM39-243ENST00000528062 ATXN3LQ9H3M9 355 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 IGFLR1Q9H665 355 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 CNGB3Q9NQW8 809 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 IL37Q9NZH6 218 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 CCDC167Q9P0B6 97 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 NUP205Q92621 2012 aa13.01□□□□□ -0.33
RBM39-243ENST00000528062 PLOD2O00469 737 aa13□□□□□ -0.33
RBM39-243ENST00000528062 CDK4P11802 303 aa13□□□□□ -0.33
RBM39-243ENST00000528062 ATP5F1P24539 256 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms