RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CASD1Q96PB1 797 aa15.04■□□□□ -0
USP47-207ENST00000527733 AGAP2Q99490 1192 aa15.04■□□□□ -0
USP47-207ENST00000527733 MYO1GB0I1T2 1018 aa15.04■□□□□ -0
USP47-207ENST00000527733 AZIN1O14977 448 aa15.04■□□□□ -0
USP47-207ENST00000527733 ZW10O43264 779 aa15.04■□□□□ -0
USP47-207ENST00000527733 SLC39A11Q8N1S5 342 aa15.04■□□□□ -0
USP47-207ENST00000527733 TOP1MTQ969P6 601 aa15.04■□□□□ -0
USP47-207ENST00000527733 FAM120BQ96EK7 910 aaKnown RBP15.04■□□□□ -0
USP47-207ENST00000527733 KATNBL1Q9H079 304 aa15.04■□□□□ -0
USP47-207ENST00000527733 NOD2Q9HC29 1040 aa15.04■□□□□ -0
USP47-207ENST00000527733 PSMD12O00232 456 aaPredicted RBP15.04■□□□□ -0
USP47-207ENST00000527733 PM20D1Q6GTS8 502 aa15.04■□□□□ -0
USP47-207ENST00000527733 UMODL1-AS1Q8N2C9 162 aa15.04■□□□□ -0
USP47-207ENST00000527733 MIPOL1Q8TD10 442 aa15.04■□□□□ -0
USP47-207ENST00000527733 TLCD1Q96CP7 247 aa15.04■□□□□ -0
USP47-207ENST00000527733 QRFPRQ96P65 431 aa15.04■□□□□ -0
USP47-207ENST00000527733 ZNF711Q9Y462 761 aa15.04■□□□□ -0
USP47-207ENST00000527733 CCDC154A6NI56 674 aa15.03■□□□□ -0
USP47-207ENST00000527733 H3BM21 787 aa15.03■□□□□ -0
USP47-207ENST00000527733 AGPSO00116 658 aa15.03■□□□□ -0
USP47-207ENST00000527733 TPST1O60507 370 aa15.03■□□□□ -0
USP47-207ENST00000527733 PEX11AO75192 247 aa15.03■□□□□ -0
USP47-207ENST00000527733 SH3BGRLO75368 114 aa15.03■□□□□ -0
USP47-207ENST00000527733 IPO13O94829 963 aaKnown RBP15.03■□□□□ -0
USP47-207ENST00000527733 CBX6O95503 412 aa15.03■□□□□ -0
USP47-207ENST00000527733 CNPP09543 421 aaKnown RBP15.03■□□□□ -0
USP47-207ENST00000527733 TAS2R39P59534 338 aa15.03■□□□□ -0
USP47-207ENST00000527733 DSG1Q02413 1049 aa15.03■□□□□ -0
USP47-207ENST00000527733 ALKAL1Q6UXT8 129 aa15.03■□□□□ -0
USP47-207ENST00000527733 GDPD4Q6W3E5 623 aa15.03■□□□□ -0
USP47-207ENST00000527733 ZBTB2Q8N680 514 aa15.03■□□□□ -0
USP47-207ENST00000527733 STARD8Q92502 1023 aa15.03■□□□□ -0
USP47-207ENST00000527733 BTBD10Q9BSF8 475 aa15.03■□□□□ -0
USP47-207ENST00000527733 SMG9Q9H0W8 520 aaKnown RBP15.03■□□□□ -0
USP47-207ENST00000527733 SELENONQ9NZV5 590 aa15.03■□□□□ -0
USP47-207ENST00000527733 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.03■□□□□ -0
USP47-207ENST00000527733 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.03■□□□□ -0
USP47-207ENST00000527733 TRAFD1O14545 582 aaPredicted RBP15.03■□□□□ -0
USP47-207ENST00000527733 DEFB103AP81534 67 aa15.03■□□□□ -0
USP47-207ENST00000527733 TCEA2Q15560 299 aa15.03■□□□□ -0
USP47-207ENST00000527733 RALGPS1Q5JS13 557 aa15.03■□□□□ -0
USP47-207ENST00000527733 CYB5D1Q6P9G0 228 aa15.03■□□□□ -0
USP47-207ENST00000527733 SYT12Q8IV01 421 aa15.03■□□□□ -0
USP47-207ENST00000527733 FLCNQ8NFG4 579 aa15.03■□□□□ -0
USP47-207ENST00000527733 HERVK_113Q902F9 699 aa15.03■□□□□ -0
USP47-207ENST00000527733 PPP3R2Q96LZ3 170 aa15.03■□□□□ -0
USP47-207ENST00000527733 NLNQ9BYT8 704 aa15.03■□□□□ -0
USP47-207ENST00000527733 INTS10Q9NVR2 710 aaKnown RBP15.03■□□□□ -0
USP47-207ENST00000527733 POLR3BQ9NW08 1133 aaPredicted RBP15.03■□□□□ -0
USP47-207ENST00000527733 CD84Q9UIB8 345 aa15.03■□□□□ -0
USP47-207ENST00000527733 ARL5AQ9Y689 179 aa15.03■□□□□ -0
USP47-207ENST00000527733 CCDC162PA2VCL2 907 aa15.03■□□□□ -0
USP47-207ENST00000527733 FFAR3O14843 346 aa15.03■□□□□ -0
USP47-207ENST00000527733 GPR42O15529 346 aa15.03■□□□□ -0
USP47-207ENST00000527733 TCEA3O75764 348 aa15.03■□□□□ -0
USP47-207ENST00000527733 SEC13P55735 322 aa15.03■□□□□ -0
USP47-207ENST00000527733 UBE3AQ05086 875 aa15.03■□□□□ -0
USP47-207ENST00000527733 DSC3Q14574 896 aa15.03■□□□□ -0
USP47-207ENST00000527733 MFSD4BQ5TF39 518 aa15.03■□□□□ -0
USP47-207ENST00000527733 RNF43Q68DV7 783 aa15.03■□□□□ -0
USP47-207ENST00000527733 PRMT9Q6P2P2 845 aa15.03■□□□□ -0
USP47-207ENST00000527733 OR13C4Q8NGS5 318 aa15.03■□□□□ -0
USP47-207ENST00000527733 PADI4Q9UM07 663 aa15.03■□□□□ -0
USP47-207ENST00000527733 NDRG2Q9UN36 371 aaKnown RBP15.03■□□□□ -0
USP47-207ENST00000527733 SNX5Q9Y5X3 404 aa15.03■□□□□ -0
USP47-207ENST00000527733 PRRC2BQ5JSZ5 2229 aaKnown RBP15.02■□□□□ -0
USP47-207ENST00000527733 S100A3P33764 101 aa15.02■□□□□ -0
USP47-207ENST00000527733 CHRNB3Q05901 458 aa15.02■□□□□ -0
USP47-207ENST00000527733 CCDC157Q569K6 752 aa15.02■□□□□ -0
USP47-207ENST00000527733 SIRPB2Q5JXA9 342 aa15.02■□□□□ -0
USP47-207ENST00000527733 SLC44A2Q8IWA5 706 aaPredicted RBP15.02■□□□□ -0
USP47-207ENST00000527733 CLP1Q92989 425 aaKnown RBP15.02■□□□□ -0
USP47-207ENST00000527733 AZIN2Q96A70 460 aa15.02■□□□□ -0
USP47-207ENST00000527733 PLIN3O60664 434 aa15.02■□□□□ -0
USP47-207ENST00000527733 LYPLA1O75608 230 aaPredicted RBP15.02■□□□□ -0
USP47-207ENST00000527733 WDR47O94967 919 aa15.02■□□□□ -0
USP47-207ENST00000527733 VAV1P15498 845 aa15.02■□□□□ -0
USP47-207ENST00000527733 NSG1P42857 185 aa15.02■□□□□ -0
USP47-207ENST00000527733 PRKD1Q15139 912 aaPredicted RBP15.02■□□□□ -0
USP47-207ENST00000527733 TRMT5Q32P41 509 aaKnown RBP15.02■□□□□ -0
USP47-207ENST00000527733 TCEAL8Q8IYN2 117 aa15.02■□□□□ -0
USP47-207ENST00000527733 IRF7Q92985 503 aa15.02■□□□□ -0
USP47-207ENST00000527733 MTFMTQ96DP5 389 aaKnown RBP15.02■□□□□ -0
USP47-207ENST00000527733 SPATS2LQ9NUQ6 558 aaKnown RBP15.02■□□□□ -0
USP47-207ENST00000527733 SLC27A6Q9Y2P4 619 aa15.02■□□□□ -0
USP47-207ENST00000527733 TTC24A2A3L6 582 aaPredicted RBP15.02□□□□□ -0.01
USP47-207ENST00000527733 NPEPPSL1A6NEC2 478 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 LRRC72A6NJI9 287 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 TGM5O43548 720 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 SLC1A2P43004 574 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 SKP1P63208 163 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 ZNF252P-AS1Q0IIN9 211 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 CPSF6Q16630 551 aaKnown RBP eCLIP15.02□□□□□ -0.01
USP47-207ENST00000527733 GPR33Q49SQ1 333 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 FAM182AQ5T1J6 154 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 BRAT1Q6PJG6 821 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 VITQ6UXI7 678 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.02□□□□□ -0.01
USP47-207ENST00000527733 Q6ZVU0 165 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 ZNF438Q7Z4V0 828 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms