RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 CNTD1Q8N815 330 aa21.04■□□□□ 0.96
PKP3-205ENST00000527442 ZNF548Q8NEK5 533 aaPredicted RBP21.04■□□□□ 0.96
PKP3-205ENST00000527442 CEP41Q9BYV8 373 aa21.04■□□□□ 0.96
PKP3-205ENST00000527442 GBA3Q9H227 469 aa21.04■□□□□ 0.96
PKP3-205ENST00000527442 KLHL8Q9P2G9 620 aaPredicted RBP21.04■□□□□ 0.96
PKP3-205ENST00000527442 ASIC3Q9UHC3 531 aa21.04■□□□□ 0.96
PKP3-205ENST00000527442 RP1P56715 2156 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 PMS2P1A4D2B8 440 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 SMAD6O43541 496 aaKnown RBP21.03■□□□□ 0.96
PKP3-205ENST00000527442 HLA-DQB2P05538 268 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 RHOXF2BP0C7M4 288 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 IVDP26440 423 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 HSPA9P38646 679 aaKnown RBP21.03■□□□□ 0.96
PKP3-205ENST00000527442 SERPINH1P50454 418 aaKnown RBP21.03■□□□□ 0.96
PKP3-205ENST00000527442 HNRNPKP61978 463 aaKnown RBP eCLIP21.03■□□□□ 0.961e-8■■■■□ 22.4
PKP3-205ENST00000527442 SKOR1P84550 965 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 SLC7A5Q01650 507 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 FZD2Q14332 565 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 TRIP13Q15645 432 aaPredicted RBP21.03■□□□□ 0.96
PKP3-205ENST00000527442 CDKN3Q16667 212 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 KIAA1614Q5VZ46 1190 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 ALG1LQ6GMV1 187 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 GUSBP11Q6P575 273 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 IGF2-ASQ6U949 168 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 ARHGEF18Q6ZSZ5 1173 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 BBS5Q8N3I7 341 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 ATP11CQ8NB49 1132 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 TMIEQ8NEW7 156 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 GRIN3AQ8TCU5 1115 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 ATXN7L3BQ96GX2 97 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 BMFQ96LC9 184 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 PSKH2Q96QS6 385 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 RHOXF2Q9BQY4 288 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 DUSP23Q9BVJ7 150 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 CLMPQ9H6B4 373 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 ANKZF1Q9H8Y5 726 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 DYRK4Q9NR20 520 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 EVA1BQ9NVM1 165 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 HAUS2Q9NVX0 235 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 RBM22Q9NW64 420 aaKnown RBP eCLIP21.03■□□□□ 0.96
PKP3-205ENST00000527442 SEPT3Q9UH03 358 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 ATP8A1Q9Y2Q0 1164 aa21.03■□□□□ 0.96
PKP3-205ENST00000527442 FARP1Q9Y4F1 1045 aaPredicted RBP21.03■□□□□ 0.96
PKP3-205ENST00000527442 POM121BA6NF01 834 aa21.02■□□□□ 0.96
PKP3-205ENST00000527442 CTIFO43310 598 aaKnown RBP21.02■□□□□ 0.96
PKP3-205ENST00000527442 CD68P34810 354 aaPredicted RBP21.02■□□□□ 0.96
PKP3-205ENST00000527442 DRG2P55039 364 aaKnown RBP21.02■□□□□ 0.96
PKP3-205ENST00000527442 FGL2Q14314 439 aa21.02■□□□□ 0.96
PKP3-205ENST00000527442 ZNF235Q14590 738 aa21.02■□□□□ 0.96
PKP3-205ENST00000527442 ERCC6LQ2NKX8 1250 aa21.02■□□□□ 0.96
PKP3-205ENST00000527442 ZCCHC8Q6NZY4 707 aaKnown RBP21.02■□□□□ 0.96
PKP3-205ENST00000527442 KYAT3Q6YP21 454 aaKnown RBP21.02■□□□□ 0.96
PKP3-205ENST00000527442 ERN2Q76MJ5 926 aaKnown RBP21.02■□□□□ 0.96
PKP3-205ENST00000527442 KLHDC8BQ8IXV7 354 aa21.02■□□□□ 0.96
PKP3-205ENST00000527442 LRRC45Q96CN5 670 aa21.02■□□□□ 0.96
PKP3-205ENST00000527442 MED8Q96G25 268 aa21.02■□□□□ 0.96
PKP3-205ENST00000527442 PRR11Q96HE9 360 aaPredicted RBP21.02■□□□□ 0.96
PKP3-205ENST00000527442 MGME1Q9BQP7 344 aa21.02■□□□□ 0.96
PKP3-205ENST00000527442 ENTPD2Q9Y5L3 495 aa21.02■□□□□ 0.96
PKP3-205ENST00000527442 CPED1A4D0V7 1026 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 NDC80O14777 642 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 RAD51BO15315 384 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 TMCC1O94876 653 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 PRNPP04156 253 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 NME1P15531 152 aaKnown RBP21.01■□□□□ 0.95
PKP3-205ENST00000527442 RBMS1P29558 406 aaKnown RBP21.01■□□□□ 0.95
PKP3-205ENST00000527442 FDFT1P37268 417 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 VPS41P49754 854 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 CCDC15Q0P6D6 951 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 GPS1Q13098 491 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 ARSIQ5FYB1 569 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 C22orf39Q6P5X5 142 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 CRTC1Q6UUV9 634 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 LINGO4Q6UY18 593 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 LEKR1Q6ZMV7 388 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 PID1Q7Z2X4 250 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 EFL1Q7Z2Z2 1120 aaKnown RBP21.01■□□□□ 0.95
PKP3-205ENST00000527442 SNF8Q96H20 258 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 SLC46A1Q96NT5 459 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 AGAP3Q96P47 875 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 PPP1R2P1Q96PQ5 205 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 CINPQ9BW66 212 aaPredicted RBP21.01■□□□□ 0.95
PKP3-205ENST00000527442 HDAC8Q9BY41 377 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 TNKS2Q9H2K2 1166 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.01■□□□□ 0.95
PKP3-205ENST00000527442 ACTL7AQ9Y615 435 aa21.01■□□□□ 0.95
PKP3-205ENST00000527442 V9GYY5 206 aaPredicted RBP21.01■□□□□ 0.95
PKP3-205ENST00000527442 K7ENP7 123 aa21■□□□□ 0.95
PKP3-205ENST00000527442 DNALI1O14645 258 aaPredicted RBP21■□□□□ 0.95
PKP3-205ENST00000527442 CASC3O15234 703 aaKnown RBP21■□□□□ 0.95
PKP3-205ENST00000527442 SEC31AO94979 1220 aaKnown RBP21■□□□□ 0.95
PKP3-205ENST00000527442 CSF2P04141 144 aa21■□□□□ 0.95
PKP3-205ENST00000527442 NFKB1P19838 968 aa21■□□□□ 0.95
PKP3-205ENST00000527442 MAGEA6P43360 314 aa21■□□□□ 0.95
PKP3-205ENST00000527442 RPL21P46778 160 aaKnown RBP21■□□□□ 0.95
PKP3-205ENST00000527442 GUCY2DQ02846 1103 aa21■□□□□ 0.95
PKP3-205ENST00000527442 SEMA5AQ13591 1074 aa21■□□□□ 0.95
PKP3-205ENST00000527442 CYTH1Q15438 398 aa21■□□□□ 0.95
PKP3-205ENST00000527442 KCTD19Q17RG1 926 aaPredicted RBP21■□□□□ 0.95
PKP3-205ENST00000527442 PARP6Q2NL67 630 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms