RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 PRR16Q569H4 304 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 PAGE2BQ5JRK9 111 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 ZNF484Q5JVG2 852 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 MPP7Q5T2T1 576 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 IFIT1BQ5T764 474 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 AADACL2Q6P093 401 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 PNCKQ6P2M8 343 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 ANGPTL8Q6UXH0 198 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 ZNF782Q6ZMW2 699 aaPredicted RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 FRMD7Q6ZUT3 714 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 GPAT4Q86UL3 456 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 TSPYL5Q86VY4 417 aaPredicted RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 AMIGO1Q86WK6 493 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 ADGRG3Q86Y34 549 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 RAB43Q86YS6 212 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 HID1Q8IV36 788 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 TCTE3Q8IZS6 198 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 C2orf69Q8N8R5 385 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 TMEM35BQ8NCS4 154 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 OR7G3Q8NG95 312 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 OR7A2PQ8NGA2 310 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 RP9Q8TA86 221 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 SLC7A14Q8TBB6 771 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 ETNPPLQ8TBG4 499 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 PIWIL2Q8TC59 973 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 SYTL5Q8TDW5 730 aaPredicted RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 UTP15Q8TED0 518 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 DCAKDQ8WVC6 231 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 DNAJA4Q8WW22 397 aaPredicted RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 C1orf54Q8WWF1 131 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 STON2Q8WXE9 905 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 FKBP10Q96AY3 582 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 PHF21AQ96BD5 680 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 PPWD1Q96BP3 646 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 ASB9Q96DX5 294 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 PAWRQ96IZ0 340 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 MEGF10Q96KG7 1140 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 CSF3RQ99062 836 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 POP1Q99575 1024 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 PIP5K1AQ99755 562 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 PELOQ9BRX2 385 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 ZNF416Q9BWM5 594 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 TRIM8Q9BZR9 551 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 TGIF2Q9GZN2 237 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 NYXQ9GZU5 481 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 DSN1Q9H410 356 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 TRIM45Q9H8W5 580 aaPredicted RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 LRRC40Q9H9A6 602 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 ALG13Q9NP73 1137 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 PNPLA8Q9NP80 782 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 POLE4Q9NR33 117 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 PCDHB16Q9NRJ7 776 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 SNX15Q9NRS6 342 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 IFT80Q9P2H3 777 aaPredicted RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 CYB5R1Q9UHQ9 305 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 TINAGQ9UJW2 476 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 FBXO5Q9UKT4 447 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 PCOLCE2Q9UKZ9 415 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 RAB23Q9ULC3 237 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 MAN2B2Q9Y2E5 1009 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 DERAQ9Y315 318 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 PCDHB12Q9Y5F1 795 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 GMPPBQ9Y5P6 360 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 SNX13Q9Y5W8 968 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 COPG1Q9Y678 874 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 EP400Q96L91 3159 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 USP54Q70EL1 1684 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 A0A1B0GVM2 712 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 TCRBV7S2A1N4TA0A589 114 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 HEATR9A2RTY3 570 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 KRT87PA6NCN2 255 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 F5H6K3 240 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 LOC110117498-PIK3R3F6TDL0 507 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 H0YAE9 185 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 EEF2KO00418 725 aaKnown RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 ACOT8O14734 319 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 PAPSS1O43252 624 aaPredicted RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 CPNE3O75131 537 aaKnown RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 TSC22D2O75157 780 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 KATNA1O75449 491 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 SCO1O75880 301 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 PIGNO95427 931 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 FOSP01100 380 aaPredicted RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 PROS1P07225 676 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 TMEM191BP0C7N4 346 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 SRCP12931 536 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 HOXD8P13378 290 aaPredicted RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 ENO3P13929 434 aaPredicted RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 SPNP16150 400 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 ZNF30P17039 623 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 XRCC1P18887 633 aaPredicted RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 DDCP20711 480 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 KLRC2P26717 231 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 PSMD8P48556 350 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 MARCKSL1P49006 195 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 NUDT2P50583 147 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 SCNN1GP51170 649 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 GBX2P52951 348 aaPredicted RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 PLA2G16P53816 162 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 AIF1P55008 147 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms