RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 BPIFA1Q9NP55 256 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 B4GALT6Q9UBX8 382 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 ACOT9Q9Y305 439 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 VWA7Q9Y334 891 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 COMMD10Q9Y6G5 202 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 BPTFQ12830 3046 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 COL4A2P08572 1712 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 NDUFS3O75489 264 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 PROCP04070 461 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 BMP1P13497 986 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 TIMP2P16035 220 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 SP100P23497 879 aaPredicted RBP20.44■□□□□ 0.86
SMCO4-203ENST00000526869 ITGB7P26010 798 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 ADARP55265 1226 aaKnown RBP20.44■□□□□ 0.86
SMCO4-203ENST00000526869 TSNAXIP1Q2TAA8 658 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 GPR33Q49SQ1 333 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 ZRANB3Q5FWF4 1079 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 RBM20Q5T481 1227 aaKnown RBP20.44■□□□□ 0.86
SMCO4-203ENST00000526869 N4BP2L1Q5TBK1 243 aaPredicted RBP20.44■□□□□ 0.86
SMCO4-203ENST00000526869 LRRC66Q68CR7 880 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 MICALCLQ6ZW33 695 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 DPPA4Q7L190 304 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 LDB1Q86U70 411 aaPredicted RBP20.44■□□□□ 0.86
SMCO4-203ENST00000526869 TSPAN33Q86UF1 283 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 SFTPA1Q8IWL2 248 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 RAVER1Q8IY67 606 aaKnown RBP20.44■□□□□ 0.86
SMCO4-203ENST00000526869 PLCD3Q8N3E9 789 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 DTX3LQ8TDB6 740 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 LRRC8CQ8TDW0 803 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 PBXIP1Q96AQ6 731 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 PLEKHG4BQ96PX9 1271 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 AARSD1Q9BTE6 412 aaKnown RBP20.44■□□□□ 0.86
SMCO4-203ENST00000526869 C1QTNF1Q9BXJ1 281 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 C12orf65Q9H3J6 166 aaKnown RBP20.44■□□□□ 0.86
SMCO4-203ENST00000526869 MTG2Q9H4K7 406 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 UBE2ZQ9H832 354 aaPredicted RBP20.44■□□□□ 0.86
SMCO4-203ENST00000526869 RAD18Q9NS91 495 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 NFKBIL1Q9UBC1 381 aaPredicted RBP20.44■□□□□ 0.86
SMCO4-203ENST00000526869 MID2Q9UJV3 735 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 EMCNQ9ULC0 261 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 TRIOBPQ9H2D6 2365 aa20.44■□□□□ 0.86
SMCO4-203ENST00000526869 TRBV5-4A0A0C4DH59 114 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 RGSL1A5PLK6 1076 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 C16orf96A6NNT2 1141 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 TCP11X1B4DZS4 312 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 H3BQ06 376 aaPredicted RBP20.43■□□□□ 0.86
SMCO4-203ENST00000526869 GAPDHSO14556 408 aaPredicted RBP20.43■□□□□ 0.86
SMCO4-203ENST00000526869 NDUFAB1O14561 156 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 KLF11O14901 512 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 MBTPS2O43462 519 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 SRP72O76094 671 aaKnown RBP20.43■□□□□ 0.86
SMCO4-203ENST00000526869 VIMP08670 466 aaKnown RBP20.43■□□□□ 0.86
SMCO4-203ENST00000526869 BPIP17213 487 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 ITGALP20701 1170 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 CD9P21926 228 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 FDXRP22570 491 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 LHCGRP22888 699 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 PTGER3P43115 390 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 KPNA2P52292 529 aaKnown RBP20.43■□□□□ 0.86
SMCO4-203ENST00000526869 MLLT1Q03111 559 aaPredicted RBP20.43■□□□□ 0.86
SMCO4-203ENST00000526869 PSAPL1Q6NUJ1 521 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 SNX20Q7Z614 316 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 CEP97Q8IW35 865 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 PIANPQ8IYJ0 282 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 LRRC34Q8IZ02 419 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 ARMC2Q8NEN0 867 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 DNASE1L2Q92874 299 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 TTC1Q99614 292 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 P2RY13Q9BPV8 354 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 SIRPGQ9P1W8 387 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 HCN2Q9UL51 889 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 PPM1HQ9ULR3 514 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 TICRRQ7Z2Z1 1910 aa20.43■□□□□ 0.86
SMCO4-203ENST00000526869 BRWD1Q9NSI6 2320 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 GLYATL1P3A0A0U1RQE8 302 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 A0A0U1RQS6 177 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 SOX1O00570 391 aaPredicted RBP20.42■□□□□ 0.86
SMCO4-203ENST00000526869 PHGDHO43175 533 aaKnown RBP20.42■□□□□ 0.86
SMCO4-203ENST00000526869 WISP3O95389 354 aaPredicted RBP20.42■□□□□ 0.86
SMCO4-203ENST00000526869 PRAMEF1O95521 474 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 BPGMP07738 259 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 XPAP23025 273 aaPredicted RBP20.42■□□□□ 0.86
SMCO4-203ENST00000526869 IL12RB1P42701 662 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 DCDC1P59894 354 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 PTSQ03393 145 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 ARHGEF7Q14155 803 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 AAK1Q2M2I8 961 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 ERAP2Q6P179 960 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 ZNF549Q6P9A3 640 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 CPLX4Q7Z7G2 160 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 ZNF366Q8N895 744 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 RDH11Q8TC12 318 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 ZNF473Q8WTR7 871 aaKnown RBP20.42■□□□□ 0.86
SMCO4-203ENST00000526869 ZNF75CPQ92670 426 aaPredicted RBP20.42■□□□□ 0.86
SMCO4-203ENST00000526869 PPP1R16AQ96I34 528 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 NDNQ99608 321 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 OLFM1Q99784 485 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 CDH19Q9H159 772 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 PCDH12Q9NPG4 1184 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 IL26Q9NPH9 171 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms