RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ATXN3P54252 364 aaPredicted RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 DCDC1P59894 354 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 CDK16Q00536 496 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 CDH17Q12864 832 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 PDE1CQ14123 709 aaPredicted RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 PTK2BQ14289 1009 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 PPP1R7Q15435 360 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 TPRG1LQ5T0D9 272 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 HENMT1Q5T8I9 393 aaKnown RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 GLT6D1Q7Z4J2 308 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 MINDY1Q8N5J2 469 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 GPR26Q8NDV2 337 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 SPATA4Q8NEY3 305 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 OR52K1Q8NGK4 314 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 OR2I1PQ8NGU4 316 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 RIOK2Q9BVS4 552 aaKnown RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 GAREM1Q9H706 876 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 IL21RQ9HBE5 538 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 TMEM9BQ9NQ34 198 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 CASS4Q9NQ75 786 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 RAD18Q9NS91 495 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 DNAAF2Q9NVR5 837 aaKnown RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 NFKBIL1Q9UBC1 381 aaPredicted RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 CDC23Q9UJX2 597 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 OR1A2Q9Y585 309 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 ARL5AQ9Y689 179 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 C2orf81A6NN90 581 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 PPFIA2O75334 1257 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 URI1O94763 535 aaPredicted RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 SLU7O95391 586 aaKnown RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 CRTAMO95727 393 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 PYGLP06737 847 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 TPSB2P20231 275 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 LPOP22079 712 aaPredicted RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 GPR1P46091 355 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 RXRGP48443 463 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 THOP1P52888 689 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 ARHGAP8P85298 464 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 DR1Q01658 176 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 PTK6Q13882 451 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 FZD2Q14332 565 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 KCNJ11Q14654 390 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 TPSAB1Q15661 275 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 PRAMEF14Q5SWL7 426 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 STPG1Q5TH74 334 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 RAET1GQ6H3X3 334 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 PPP1R21Q6ZMI0 780 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 SYDE1Q6ZW31 735 aaPredicted RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 ZNF572Q7Z3I7 529 aaPredicted RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 MTERF4Q7Z6M4 381 aaKnown RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 DNAAF3Q8N9W5 541 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 ANKRD7Q92527 254 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 FUBP1Q96AE4 644 aaKnown RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 PLEKHG4BQ96PX9 1271 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 AGAP2Q99490 1192 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 ELF4Q99607 663 aaPredicted RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 TEX101Q9BY14 249 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 WDR26Q9H7D7 661 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 BPIFA1Q9NP55 256 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 PIH1D1Q9NWS0 290 aaKnown RBP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMPD1-202ENST00000526280 PKP3Q9Y446 797 aa12.88□□□□□ -0.35
SMPD1-202ENST00000526280 TMEM131Q92545 1883 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 A0A1B0GTQ1 180 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 TCRBV7S3A2A0A539 114 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 C4orf47A7E2U8 309 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 CACNB4O00305 520 aaPredicted RBP12.87□□□□□ -0.35
SMPD1-202ENST00000526280 STX7O15400 261 aaKnown RBP12.87□□□□□ -0.35
SMPD1-202ENST00000526280 LDB2O43679 373 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 BUD23O43709 281 aaKnown RBP12.87□□□□□ -0.35
SMPD1-202ENST00000526280 ZNF883P0CG24 379 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 ADCY8P40145 1251 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 LIMK1P53667 647 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 KIAA1024LP59773 190 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 CDK3Q00526 305 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 PDE1BQ01064 536 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 TUBB2AQ13885 445 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 PTPRCAPQ14761 206 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 POU6F1Q14863 301 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 NFATC4Q14934 902 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 SHBQ15464 509 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 CERCAMQ5T4B2 595 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 ZDHHC20Q5W0Z9 365 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 ADAMTSL4Q6UY14 1074 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 MACC1Q6ZN28 852 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 HEATR4Q86WZ0 1026 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 OXR1Q8N573 874 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 DTX3LQ8TDB6 740 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 CPT1BQ92523 772 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 KRT12Q99456 494 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 C19orf43Q9BQ61 176 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 TUBB2BQ9BVA1 445 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 LGR4Q9BXB1 951 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 IL26Q9NPH9 171 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 PHPT1Q9NRX4 125 aaPredicted RBP12.87□□□□□ -0.35
SMPD1-202ENST00000526280 CNOT6Q9ULM6 557 aaKnown RBP12.87□□□□□ -0.35
SMPD1-202ENST00000526280 FNDC3AQ9Y2H6 1198 aaKnown RBP12.87□□□□□ -0.35
SMPD1-202ENST00000526280 KCTD3Q9Y597 815 aa12.87□□□□□ -0.35
SMPD1-202ENST00000526280 TP53BP1Q12888 1972 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms