RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 CCDC96Q2M329 555 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 WDR38Q5JTN6 314 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 WDR45BQ5MNZ6 344 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 TXNDC8Q6A555 127 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 CPLX2Q6PUV4 134 aaKnown RBP3.8□□□□□ -1.8
CSDE1-210ENST00000525878 SUGP1Q8IWZ8 645 aaKnown RBP3.8□□□□□ -1.8
CSDE1-210ENST00000525878 C11orf65Q8NCR3 313 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 TNIP2Q8NFZ5 429 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 RUFY2Q8WXA3 655 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 TM9SF4Q92544 642 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 STAMQ92783 540 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 ELP4Q96EB1 424 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 LRR1Q96L50 414 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 COG8Q96MW5 612 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 BBS4Q96RK4 519 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 ATOH8Q96SQ7 321 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 REEP2Q9BRK0 252 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 DCTN5Q9BTE1 182 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 HINT3Q9NQE9 182 aaKnown RBP3.8□□□□□ -1.8
CSDE1-210ENST00000525878 ZNHIT1O43257 154 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 SYNGR3O43761 229 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 FTCDO95954 541 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 IGLV1-44P01699 117 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 PRSS56P0CW18 603 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 GNB3P16520 340 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 CHRNB4P30926 498 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 EFNB1P98172 346 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 MORC3Q14149 939 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 HIST2H2ACQ16777 129 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-210ENST00000525878 GGNBP1Q5YKI7 109 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 FAM53AQ6NSI3 398 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-210ENST00000525878 BRAT1Q6PJG6 821 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 C15orf39Q6ZRI6 1047 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 MYCT1Q8N699 235 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 VPS37AQ8NEZ2 397 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 HUS1BQ8NHY5 278 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 ZNF354BQ96LW1 612 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 NEURL2Q9BR09 285 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 TFB2MQ9H5Q4 396 aaKnown RBP3.79□□□□□ -1.8
CSDE1-210ENST00000525878 BPIFA1Q9NP55 256 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 TAGLN3Q9UI15 199 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 TTC7AQ9ULT0 858 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-210ENST00000525878 FAM96BQ9Y3D0 163 aa3.79□□□□□ -1.8
CSDE1-210ENST00000525878 KIAA1210Q9ULL0 1709 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 PTPRCP08575 1304 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 HHLA1C9JL84 531 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 TFP02787 698 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 GALTP07902 379 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 POU1F1P28069 291 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 GPD2P43304 727 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 FASLGP48023 281 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 IRX1P78414 480 aaPredicted RBP3.78□□□□□ -1.8
CSDE1-210ENST00000525878 FAM171BQ6P995 826 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 C2CD5Q86YS7 1000 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 PCDH20Q8N6Y1 951 aaKnown RBP3.78□□□□□ -1.8
CSDE1-210ENST00000525878 STPG4Q8N801 248 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 OR5R1Q8NH85 324 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 FCAMRQ8WWV6 532 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 SLC41A2Q96JW4 573 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 FAM110AQ9BQ89 295 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 GPR108Q9NPR9 543 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 C2orf42Q9NWW7 574 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 HSPB7Q9UBY9 170 aa3.78□□□□□ -1.8
CSDE1-210ENST00000525878 URODP06132 367 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 FAM106CPP0CH98 169 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 AZU1P20160 251 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 ZNF10P21506 573 aaPredicted RBP3.77□□□□□ -1.81
CSDE1-210ENST00000525878 HOXC8P31273 242 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 KRT9P35527 623 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 RNPS1Q15287 305 aaKnown RBP3.77□□□□□ -1.81
CSDE1-210ENST00000525878 FRG2Q64ET8 278 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 HIST2H2BDQ6DRA6 164 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 ZNF280DQ6N043 979 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 TMEM81Q6P7N7 255 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 BBS12Q6ZW61 710 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 SLC46A3Q7Z3Q1 461 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 WDR20Q8TBZ3 569 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 RHBDF1Q96CC6 855 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 QRFPRQ96P65 431 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 TKTL2Q9H0I9 626 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 NDST4Q9H3R1 872 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 ERVMER34-1Q9H9K5 563 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 SLC52A3Q9NQ40 469 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 C20orf141Q9NUB4 165 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 POLG2Q9UHN1 485 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 PADI3Q9ULW8 664 aa3.77□□□□□ -1.81
CSDE1-210ENST00000525878 A0A087X002 238 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 ZCWPW2A0A1B0GU75 182 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 CTSVO60911 334 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 TACC1O75410 805 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 ZNF26P17031 533 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-210ENST00000525878 PAPOLAP51003 745 aaKnown RBP3.76□□□□□ -1.81
CSDE1-210ENST00000525878 DSCR10P59022 87 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 RUNX1T1Q06455 604 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 TAF5Q15542 800 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 MAP3K21Q5TCX8 1036 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 ANKRD45Q5TZF3 282 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 OR7E24Q6IFN5 339 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 DUS1LQ6P1R4 473 aaKnown RBP3.76□□□□□ -1.81
CSDE1-210ENST00000525878 SH2D6Q7Z4S9 175 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms