RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SEZ6L2Q6UXD5 910 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 KIF6Q6ZMV9 814 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 ZNF572Q7Z3I7 529 aaPredicted RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 PPP1R32Q7Z5V6 425 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 CENPVQ7Z7K6 275 aaPredicted RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 WDR5BQ86VZ2 330 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 CCDC65Q8IXS2 484 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 MFSD4AQ8N468 514 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 RASGEF1AQ8N9B8 481 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 RNF169Q8NCN4 708 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 BHLHE23Q8NDY6 225 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 CFAP61Q8NHU2 1237 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 ACMSDQ8TDX5 336 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 LPGAT1Q92604 370 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 SCAMP4Q969E2 229 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 PPP2R3CQ969Q6 453 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 NT5C3BQ969T7 300 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 SLC41A2Q96JW4 573 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 IFT74Q96LB3 600 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 COQ10AQ96MF6 247 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 PWWP2AQ96N64 755 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 ZNF577Q9BSK1 485 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 CDK19Q9BWU1 502 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 SIK2Q9H0K1 926 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 MRPL18Q9H0U6 180 aaKnown RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 PNNQ9H307 717 aaKnown RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 CARS2Q9HA77 564 aaKnown RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 KCNK13Q9HB14 408 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 GPN1Q9HCN4 374 aaPredicted RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 SLC39A2Q9NP94 309 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 PIH1D3Q9NQM4 214 aaKnown RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 C20orf141Q9NUB4 165 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 AGPAT5Q9NUQ2 364 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 SPATA6Q9NWH7 488 aaPredicted RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 MOCS1Q9NZB8 636 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 DLGAP2Q9P1A6 1054 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 PEMTQ9UBM1 199 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 HEY2Q9UBP5 337 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 HESX1Q9UBX0 185 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 DNAI1Q9UI46 699 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 HAO1Q9UJM8 370 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 TRPC5Q9UL62 973 aaPredicted RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 WBP11Q9Y2W2 641 aaKnown RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 ATRNL1Q5VV63 1379 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 PLB1Q6P1J6 1458 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 MYO3BQ8WXR4 1341 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 A0A1W2PR77 199 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 SLC15A5A6NIM6 579 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 NPIPB13A6NJU9 1138 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 YDJCA8MPS7 323 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 WASH4PA8MWX3 477 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 NPIPB4C9JG80 1138 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 SLC16A3O15427 465 aaKnown RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 PLRG1O43660 514 aaKnown RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 HYAL3O43820 417 aaPredicted RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 NDUFS3O75489 264 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 ITGA10O75578 1167 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 LEFTY1O75610 366 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 RAD17O75943 681 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 RHOBTB1O94844 696 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 MFN2O95140 757 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 GH1P01241 217 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 NFICP08651 508 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 OR52Z1P0C646 297 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 PKMP14618 531 aaKnown RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 MMP9P14780 707 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 HPGDP15428 266 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 ADRA1DP25100 572 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 MGAT1P26572 445 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 CDC25CP30307 473 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 NTSR1P30989 418 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 FMO4P31512 558 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 CSF2RBP32927 897 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 PTPN7P35236 360 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 NF2P35240 595 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 MTNR1AP48039 350 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 SUOXP51687 545 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 OAZ1P54368 228 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 GALCP54803 685 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 F2RL1P55085 397 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 ATP5IP56385 69 aaPredicted RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 MAP3K7CLP57077 242 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 NKX3-2P78367 333 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 RBPJQ06330 500 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 CXCL9Q07325 125 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 MZT1Q08AG7 82 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 DHX34Q14147 1143 aaKnown RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 SNAPC1Q16533 368 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 ZIK1Q3SY52 487 aaPredicted RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 CYP27C1Q4G0S4 372 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 RALGPS1Q5JS13 557 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 ATG9BQ674R7 924 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 PDPK2PQ6A1A2 396 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 TTC19Q6DKK2 380 aaPredicted RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 WBP2NLQ6ICG8 309 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 SLC27A1Q6PCB7 646 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 BRAT1Q6PJG6 821 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 C6orf89Q6UWU4 347 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 ARSKQ6UWY0 536 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms