RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CTSKP43235 329 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 RPL21P46778 160 aaKnown RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 FNTAP49354 379 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 THOP1P52888 689 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 ITGA8P53708 1063 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 NXPH1P58417 271 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 PFN3P60673 137 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 RPL26P61254 145 aaKnown RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 CDH17Q12864 832 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 EIF2B5Q13144 721 aaKnown RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 MSLNQ13421 630 aaPredicted RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 PTK6Q13882 451 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 KCNJ11Q14654 390 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 TEAD4Q15561 434 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 TAF1AQ15573 450 aaPredicted RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 CSRP2Q16527 193 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 ALG11Q2TAA5 492 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 PLA2G4EQ3MJ16 856 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 MSS51Q4VC12 460 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 KHDC1Q4VXA5 237 aaKnown RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 CCDC157Q569K6 752 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 ZRANB3Q5FWF4 1079 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 DNTTIP2Q5QJE6 756 aaKnown RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 FNBP1LQ5T0N5 605 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 RNASEH2BQ5TBB1 312 aaKnown RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 PEAR1Q5VY43 1037 aaPredicted RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 SLC23A3Q6PIS1 610 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 CRTC3Q6UUV7 619 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF534Q76KX8 674 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 DET1Q7L5Y6 550 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 TAS2R42Q7RTR8 314 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 ABI3BPQ7Z7G0 1075 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 LDB1Q86U70 411 aaPredicted RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 HID1Q8IV36 788 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 KLHDC8BQ8IXV7 354 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 AGGF1Q8N302 714 aaeCLIP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 MFSD2AQ8NA29 543 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 NOA1Q8NC60 698 aaKnown RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 CCL4L1Q8NHW4 92 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 KIF18AQ8NI77 898 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 GDAP1Q8TB36 358 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 LMX1AQ8TE12 382 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 UBE2Q2Q8WVN8 375 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 PDXPQ96GD0 296 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 TBATAQ96M53 351 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 LYSMD1Q96S90 227 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 LRRC1Q9BTT6 524 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 APOOQ9BUR5 198 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 CARD6Q9BX69 1037 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 C1QTNF7Q9BXJ2 289 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 PCED1AQ9H1Q7 454 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 FAM83DQ9H4H8 585 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 WDR26Q9H7D7 661 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 CYP4F12Q9HCS2 524 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 FGF22Q9HCT0 170 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 IL26Q9NPH9 171 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 CASS4Q9NQ75 786 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 CHRAC1Q9NRG0 131 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 TM7SF3Q9NS93 570 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 SYBUQ9NX95 663 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 PKD2L2Q9NZM6 624 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 IL17CQ9P0M4 197 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 FAM8A1Q9UBU6 413 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 SUSD2Q9UGT4 822 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 TMPRSS11EQ9UL52 423 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 CNOT6Q9ULM6 557 aaKnown RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 RPL26L1Q9UNX3 145 aaKnown RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 BTBD3Q9Y2F9 522 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 ARIH1Q9Y4X5 557 aaPredicted RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 PCDHGA5Q9Y5G8 931 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 MAD1L1Q9Y6D9 718 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF318Q5VUA4 2279 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 NUP205Q92621 2012 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 SHROOM3Q8TF72 1996 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 CHD5Q8TDI0 1954 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 GLYATL1P3A0A0U1RQE8 302 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SPTY2D1-AS1A0A0U1RR47 76 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 DCDC2BA2VCK2 349 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 CCDC162PA2VCL2 907 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 OR2AG2A6NM03 316 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 C2orf81A6NN90 581 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 PRR5-ARHGAP8B1AHC4 643 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ESPNB1AK53 854 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 CCDC188H7C350 402 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 AGRPO00253 132 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 DNALI1O14645 258 aaPredicted RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 GIPC1O14908 333 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 PSMD3O43242 534 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SH3BP5O60239 455 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 PIAS1O75925 651 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SUN1O94901 812 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SLC25A14O95258 325 aaPredicted RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 RASGRP1O95267 797 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 PRAMEF1O95521 474 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 CRTAMO95727 393 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 GOT2P00505 430 aaKnown RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 EPOP01588 193 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 CEACAM5P06731 702 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 RHOXF2BP0C7M4 288 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms