RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SLITRK1Q96PX8 696 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 PACSIN1Q9BY11 444 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 LHX5Q9H2C1 402 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 GJB4Q9NTQ9 266 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 DNAJC17Q9NVM6 304 aaKnown RBP7.18□□□□□ -1.26
NEDD8-203ENST00000524927 SLC23A1Q9UHI7 598 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 CORO2BQ9UQ03 480 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 U3KQA8 63 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 MAP1AP78559 2803 aaPredicted RBP7.18□□□□□ -1.26
NEDD8-203ENST00000524927 MXRA5Q9NR99 2828 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 DIDO1Q9BTC0 2240 aaKnown RBP7.17□□□□□ -1.26
NEDD8-203ENST00000524927 ZNF106Q9H2Y7 1883 aaKnown RBP7.17□□□□□ -1.26
NEDD8-203ENST00000524927 SMCO2A6NFE2 343 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 B5MCH6 92 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 MKRN2OSH3BPM6 223 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 FRS3O43559 492 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 CACNG3O60359 315 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 MAGEC1O60732 1142 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 GIMD1P0DJR0 217 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 BRAFP15056 766 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 DGKAP23743 735 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 SSTR2P30874 369 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 RPS19P39019 145 aaKnown RBP7.17□□□□□ -1.26
NEDD8-203ENST00000524927 PIK3CBP42338 1070 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 ZBTB16Q05516 673 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 GRM7Q14831 915 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 ZRSR2Q15696 482 aaKnown RBP7.17□□□□□ -1.26
NEDD8-203ENST00000524927 INPP5JQ15735 1006 aaPredicted RBP7.17□□□□□ -1.26
NEDD8-203ENST00000524927 IMMTQ16891 758 aaKnown RBP7.17□□□□□ -1.26
NEDD8-203ENST00000524927 ATF7IP2Q5U623 682 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 ANKS6Q68DC2 871 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 DSTYKQ6XUX3 929 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 TGIF2LYQ8IUE0 185 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 CCDC13Q8IYE1 715 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 IL17RDQ8NFM7 739 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 NLGN4YQ8NFZ3 816 aaPredicted RBP7.17□□□□□ -1.26
NEDD8-203ENST00000524927 C18orf25Q96B23 403 aaPredicted RBP7.17□□□□□ -1.26
NEDD8-203ENST00000524927 EVI5LQ96CN4 794 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 CCDC138Q96M89 665 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 XPO6Q96QU8 1125 aaKnown RBP7.17□□□□□ -1.26
NEDD8-203ENST00000524927 OR14A2Q96R54 314 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 CPPED1Q9BRF8 314 aaPredicted RBP7.17□□□□□ -1.26
NEDD8-203ENST00000524927 CCDC94Q9BW85 323 aaPredicted RBP7.17□□□□□ -1.26
NEDD8-203ENST00000524927 TRIM9Q9C026 710 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 B3GNT4Q9C0J1 378 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 MSL2Q9HCI7 577 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 SPHK2Q9NRA0 654 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 NLGN3Q9NZ94 848 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 NCKIPSDQ9NZQ3 722 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 CFAP97Q9P2B7 532 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 THAP10Q9P2Z0 257 aaPredicted RBP7.17□□□□□ -1.26
NEDD8-203ENST00000524927 PLXNA2O75051 1894 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 CROCCQ5TZA2 2017 aa7.17□□□□□ -1.26
NEDD8-203ENST00000524927 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.16□□□□□ -1.26
NEDD8-203ENST00000524927 PRAMEF33A0A0G2JMD5 474 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 hCG_1642624A0A1W2PR95 340 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 hCG_1984214I3L0E3 225 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 K7EM74 188 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 ACKR2O00590 384 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 FFAR2O15552 330 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 PJA2O43164 708 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 PRAMEF10O60809 474 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 SORBS2O94875 1100 aaKnown RBP7.16□□□□□ -1.26
NEDD8-203ENST00000524927 OLFM2O95897 454 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 NR1D1P20393 614 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 YWHABP31946 246 aaKnown RBP7.16□□□□□ -1.26
NEDD8-203ENST00000524927 HTR3AP46098 478 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 ART1P52961 327 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 SOX8P57073 446 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 NOMO3P69849 1222 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 OVGP1Q12889 678 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 ZNF177Q13360 481 aaPredicted RBP7.16□□□□□ -1.26
NEDD8-203ENST00000524927 XKR9Q5GH70 373 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 C10orf62Q5T681 223 aaPredicted RBP7.16□□□□□ -1.26
NEDD8-203ENST00000524927 IQCHQ86VS3 1027 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 CACUL1Q86Y37 369 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 ZBTB8OSQ8IWT0 167 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 C4orf19Q8IY42 314 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 AOPEPQ8N6M6 819 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 ZNF713Q8N859 430 aaPredicted RBP7.16□□□□□ -1.26
NEDD8-203ENST00000524927 OR2T3Q8NH03 318 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 GNRHR2Q96P88 292 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 BDH2Q9BUT1 245 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 STRADBQ9C0K7 418 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 EBF2Q9HAK2 575 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 PREBQ9HCU5 417 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.16□□□□□ -1.26
NEDD8-203ENST00000524927 TAGLN3Q9UI15 199 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 CPQQ9Y646 472 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.16□□□□□ -1.26
NEDD8-203ENST00000524927 ANAPC1Q9H1A4 1944 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 FLNAP21333 2647 aaKnown RBP7.16□□□□□ -1.26
NEDD8-203ENST00000524927 POLEQ07864 2286 aa7.16□□□□□ -1.26
NEDD8-203ENST00000524927 CKAP5Q14008 2032 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 DOCK9Q9BZ29 2069 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 LRRIQ4A6NIV6 560 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 ISM1B1AKI9 464 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 KPNA5O15131 536 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 KLK2P20151 261 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 ACO1P21399 889 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms