RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 TP53INP2Q8IXH6 220 aa13.78□□□□□ -0.2
CSTF3-206ENST00000524827 UNC5BQ8IZJ1 945 aa13.78□□□□□ -0.2
CSTF3-206ENST00000524827 CBARPQ8N350 705 aaPredicted RBP13.78□□□□□ -0.2
CSTF3-206ENST00000524827 FAM26EQ8N5C1 309 aa13.78□□□□□ -0.2
CSTF3-206ENST00000524827 SLC37A2Q8TED4 501 aa13.78□□□□□ -0.2
CSTF3-206ENST00000524827 SCARF2Q96GP6 870 aaPredicted RBP13.78□□□□□ -0.2
CSTF3-206ENST00000524827 ABHD17AQ96GS6 310 aa13.78□□□□□ -0.2
CSTF3-206ENST00000524827 AHCYL2Q96HN2 611 aaKnown RBP13.78□□□□□ -0.2
CSTF3-206ENST00000524827 PEBP4Q96S96 227 aa13.78□□□□□ -0.2
CSTF3-206ENST00000524827 KCTD15Q96SI1 283 aaPredicted RBP13.78□□□□□ -0.2
CSTF3-206ENST00000524827 EIF3CQ99613 913 aaKnown RBP13.78□□□□□ -0.2
CSTF3-206ENST00000524827 CTRCQ99895 268 aa13.78□□□□□ -0.2
CSTF3-206ENST00000524827 SNRNP25Q9BV90 132 aaKnown RBP13.78□□□□□ -0.2
CSTF3-206ENST00000524827 CLSTN2Q9H4D0 955 aa13.78□□□□□ -0.2
CSTF3-206ENST00000524827 PLAAQ9Y263 795 aa13.78□□□□□ -0.2
CSTF3-206ENST00000524827 SIK3Q9Y2K2 1263 aa13.78□□□□□ -0.2
CSTF3-206ENST00000524827 A0A1W2PQ67 120 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 NPIPB15A6NHN6 443 aaPredicted RBP13.77□□□□□ -0.21
CSTF3-206ENST00000524827 A8MU76 341 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 MYO9AB2RTY4 2548 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 PSMD11O00231 422 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 UTP20O75691 2785 aaKnown RBP13.77□□□□□ -0.21
CSTF3-206ENST00000524827 SOD1P00441 154 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 CYP2A6P11509 494 aaPredicted RBP13.77□□□□□ -0.21
CSTF3-206ENST00000524827 MAP4P27816 1152 aaKnown RBP13.77□□□□□ -0.21
CSTF3-206ENST00000524827 MC2RQ01718 297 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 TRAF2Q12933 501 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 ZNF235Q14590 738 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 PTPRRQ15256 657 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 KRT31Q15323 416 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 DEFB109BQ30KR1 87 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 LACTB2Q53H82 288 aaPredicted RBP13.77□□□□□ -0.21
CSTF3-206ENST00000524827 FKBP15Q5T1M5 1219 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 TIPARPQ7Z3E1 657 aaKnown RBP13.77□□□□□ -0.21
CSTF3-206ENST00000524827 TSPAN33Q86UF1 283 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 TRIM74Q86UV6 250 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 MCOLN2Q8IZK6 566 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 OR10G6Q8NH81 332 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 FNIP1Q8TF40 1166 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 APOBEC4Q8WW27 367 aaKnown RBP13.77□□□□□ -0.21
CSTF3-206ENST00000524827 STARD8Q92502 1023 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 PSMG3-AS1Q96PY0 264 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 SLC38A3Q99624 504 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 EFHD1Q9BUP0 239 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 PCSK1NQ9UHG2 260 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 ICE1Q9Y2F5 2266 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 TMEM98Q9Y2Y6 226 aa13.77□□□□□ -0.21
CSTF3-206ENST00000524827 RP1L1Q8IWN7 2480 aaPredicted RBP13.76□□□□□ -0.21
CSTF3-206ENST00000524827 UNC79Q9P2D8 2635 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 TRBV23OR9-2A0A075B6M9 112 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 BLACEA4D250 179 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 PRR19A6NJB7 356 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 STK17BO94768 372 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 MAP3K6O95382 1288 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 TNFAIP3P21580 790 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 PSMA2P25787 234 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 NFKBIAP25963 317 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 GPR1P46091 355 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 DPTQ07507 201 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 ABHD18Q0P651 414 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 PYCR3Q53H96 274 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 PPP6R3Q5H9R7 873 aaPredicted RBP13.76□□□□□ -0.21
CSTF3-206ENST00000524827 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.76□□□□□ -0.21
CSTF3-206ENST00000524827 ERMARDQ5T6L9 678 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 ATP1A1-AS1Q5TC04 95 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 CEACAM20Q6UY09 585 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 RFLNAQ6ZTI6 216 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 MARK2Q7KZI7 788 aaKnown RBP13.76□□□□□ -0.21
CSTF3-206ENST00000524827 ARHGAP22Q7Z5H3 698 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 TECPR1Q7Z6L1 1165 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 PGBD5Q8N414 524 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 SFRP1Q8N474 314 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 ARFGAP1Q8N6T3 406 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 MIB2Q96AX9 1013 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 ZNF599Q96NL3 588 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 MCCC1Q96RQ3 725 aaPredicted RBP13.76□□□□□ -0.21
CSTF3-206ENST00000524827 NUDCD1Q96RS6 583 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 AGPAT1Q99943 283 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 ZPBPQ9BS86 351 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 NOD2Q9HC29 1040 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 APMAPQ9HDC9 416 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 CD84Q9UIB8 345 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 PHTF1Q9UMS5 762 aa13.76□□□□□ -0.21
CSTF3-206ENST00000524827 TMEM184BQ9Y519 407 aaPredicted RBP13.76□□□□□ -0.21
CSTF3-206ENST00000524827 SPENQ96T58 3664 aaKnown RBP13.76□□□□□ -0.21
CSTF3-206ENST00000524827 A0A0U1RQS6 177 aa13.75□□□□□ -0.21
CSTF3-206ENST00000524827 EML2O95834 649 aa13.75□□□□□ -0.21
CSTF3-206ENST00000524827 PEX11BO96011 259 aa13.75□□□□□ -0.21
CSTF3-206ENST00000524827 MAN1A1P33908 653 aa13.75□□□□□ -0.21
CSTF3-206ENST00000524827 HSPA9P38646 679 aaKnown RBP13.75□□□□□ -0.21
CSTF3-206ENST00000524827 MC1RQ01726 317 aa13.75□□□□□ -0.21
CSTF3-206ENST00000524827 DPYSQ14117 519 aa13.75□□□□□ -0.21
CSTF3-206ENST00000524827 CDKAL1Q5VV42 579 aa13.75□□□□□ -0.21
CSTF3-206ENST00000524827 ACAD10Q6JQN1 1059 aa13.75□□□□□ -0.21
CSTF3-206ENST00000524827 C16orf46Q6P387 395 aa13.75□□□□□ -0.21
CSTF3-206ENST00000524827 WDR74Q6RFH5 385 aaPredicted RBP13.75□□□□□ -0.21
CSTF3-206ENST00000524827 ADAMTSL4Q6UY14 1074 aa13.75□□□□□ -0.21
CSTF3-206ENST00000524827 CYP4V2Q6ZWL3 525 aaPredicted RBP13.75□□□□□ -0.21
CSTF3-206ENST00000524827 USP45Q70EL2 814 aa13.75□□□□□ -0.21
CSTF3-206ENST00000524827 KDELC2Q7Z4H8 507 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms